Analysis of interatomic Contacts of Structural Units in PDB entry:
7DF6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DF6 entry

There are 2 chains in PDB entry 7DF6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 126ILE 264
B
 GLY 126ILE 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 7DF6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
241 245Right-handed 310
Helix 2
AA2
B
241 245Right-handed 310
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There are 6 sheets in PDB entry 7DF6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 135first strand
Strand 2
A
247 252anti-parallel
Strand 3
A
159 165anti-parallel
Strand 4
A
168 179anti-parallel
Strand 5
A
182 191anti-parallel
Strand 6
A
194 195anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 135first strand
Strand 2
A
247 252anti-parallel
Strand 3
A
159 165anti-parallel
Strand 4
A
168 179anti-parallel
Strand 5
A
182 191anti-parallel
Strand 6
A
199 201anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 236first strand
Strand 2
A
222 227anti-parallel
Strand 3
A
211 218anti-parallel
Strand 4
A
144 152anti-parallel
Strand 5
A
254 263anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 135first strand
Strand 2
B
247 252anti-parallel
Strand 3
B
159 165anti-parallel
Strand 4
B
168 179anti-parallel
Strand 5
B
182 191anti-parallel
Strand 6
B
194 195anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 135first strand
Strand 2
B
247 252anti-parallel
Strand 3
B
159 165anti-parallel
Strand 4
B
168 179anti-parallel
Strand 5
B
182 191anti-parallel
Strand 6
B
199 201anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 236first strand
Strand 2
B
222 227anti-parallel
Strand 3
B
211 218anti-parallel
Strand 4
B
144 152anti-parallel
Strand 5
B
254 263anti-parallel
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