Analysis of interatomic Contacts of Structural Units in PDB entry:
7DH6

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7DH6 entry

There are 4 chains in PDB entry 7DH6 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 189	ASP 492
B	TRP 190	GLU 491
C	GLN 189	ASP 492
D	GLN 189	ASP 492

There are no helices in PDB entry 7DH6

There are 28 sheets in PDB entry 7DH6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	194	201	first strand
Strand 2	A	485	491	anti-parallel
Strand 3	A	477	481	anti-parallel
Strand 4	A	465	470	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	212	first strand
Strand 2	A	218	223	anti-parallel
Strand 3	A	227	232	anti-parallel
Strand 4	A	238	243	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	249	254	first strand
Strand 2	A	260	265	anti-parallel
Strand 3	A	270	274	anti-parallel
Strand 4	A	279	283	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	291	296	first strand
Strand 2	A	302	307	anti-parallel
Strand 3	A	312	316	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	333	338	first strand
Strand 2	A	345	349	anti-parallel
Strand 3	A	354	357	anti-parallel
Strand 4	A	366	368	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	380	first strand
Strand 2	A	386	390	anti-parallel
Strand 3	A	395	399	anti-parallel
Strand 4	A	404	409	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	416	421	first strand
Strand 2	A	426	431	anti-parallel
Strand 3	A	436	440	anti-parallel
Strand 4	A	446	450	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	195	201	first strand
Strand 2	B	485	490	anti-parallel
Strand 3	B	476	481	anti-parallel
Strand 4	B	465	470	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	207	212	first strand
Strand 2	B	218	223	anti-parallel
Strand 3	B	227	232	anti-parallel
Strand 4	B	238	243	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	249	254	first strand
Strand 2	B	260	265	anti-parallel
Strand 3	B	270	274	anti-parallel
Strand 4	B	279	283	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	291	296	first strand
Strand 2	B	302	307	anti-parallel
Strand 3	B	312	316	anti-parallel
Strand 4	B	324	326	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	333	338	first strand
Strand 2	B	345	349	anti-parallel
Strand 3	B	354	358	anti-parallel
Strand 4	B	363	368	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	380	first strand
Strand 2	B	386	390	anti-parallel
Strand 3	B	395	399	anti-parallel
Strand 4	B	404	409	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	416	421	first strand
Strand 2	B	426	431	anti-parallel
Strand 3	B	436	440	anti-parallel
Strand 4	B	446	450	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	194	201	first strand
Strand 2	C	485	491	anti-parallel
Strand 3	C	476	481	anti-parallel
Strand 4	C	465	470	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	207	212	first strand
Strand 2	C	218	223	anti-parallel
Strand 3	C	228	232	anti-parallel
Strand 4	C	238	242	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	249	254	first strand
Strand 2	C	260	265	anti-parallel
Strand 3	C	270	274	anti-parallel
Strand 4	C	279	283	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	291	296	first strand
Strand 2	C	302	307	anti-parallel
Strand 3	C	312	316	anti-parallel
Strand 4	C	324	326	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	333	338	first strand
Strand 2	C	345	349	anti-parallel
Strand 3	C	354	358	anti-parallel
Strand 4	C	363	368	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	377	380	first strand
Strand 2	C	386	390	anti-parallel
Strand 3	C	395	399	anti-parallel
Strand 4	C	404	409	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	416	421	first strand
Strand 2	C	426	431	anti-parallel
Strand 3	C	436	440	anti-parallel
Strand 4	C	446	450	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	194	201	first strand
Strand 2	D	485	491	anti-parallel
Strand 3	D	476	481	anti-parallel
Strand 4	D	465	470	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	207	212	first strand
Strand 2	D	218	223	anti-parallel
Strand 3	D	227	232	anti-parallel
Strand 4	D	238	243	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	249	254	first strand
Strand 2	D	260	265	anti-parallel
Strand 3	D	270	274	anti-parallel
Strand 4	D	279	283	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	291	296	first strand
Strand 2	D	302	307	anti-parallel
Strand 3	D	312	316	anti-parallel
Strand 4	D	324	326	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	333	338	first strand
Strand 2	D	345	349	anti-parallel
Strand 3	D	354	358	anti-parallel
Strand 4	D	363	368	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	377	380	first strand
Strand 2	D	386	390	anti-parallel
Strand 3	D	395	399	anti-parallel
Strand 4	D	404	409	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	416	421	first strand
Strand 2	D	426	431	anti-parallel
Strand 3	D	436	440	anti-parallel
Strand 4	D	446	450	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7DH6

Analysis of interatomic Contacts of Structural Units in PDB entry:
7DH6