Analysis of interatomic Contacts of Structural Units in PDB entry:
7DHW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DHW entry

There is 1 chain in PDB entry 7DHW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4ARG 736
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7DHW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
66 70Right-handed 310
Helix 2
AA2
A
74 88Right-handed alpha
Helix 3
AA3
A
109 112Right-handed 310
Helix 4
AA4
A
113 120Right-handed alpha
Helix 5
AA5
A
131 147Right-handed alpha
Helix 6
AA6
A
161 178Right-handed alpha
Helix 7
AA7
A
187 202Right-handed alpha
Helix 8
AA8
A
241 245Right-handed 310
Helix 9
AA9
A
254 262Right-handed alpha
Helix 10
AB1
A
275 278Right-handed 310
Helix 11
AB2
A
279 284Right-handed alpha
Helix 12
AB3
A
294 310Right-handed alpha
Helix 13
AB4
A
312 331Right-handed alpha
Helix 14
AB5
A
347 361Right-handed alpha
Helix 15
AB6
A
364 374Right-handed alpha
Helix 16
AB7
A
389 421Right-handed alpha
Helix 17
AB8
A
445 467Right-handed alpha
Helix 18
AB9
A
467 477Right-handed alpha
Helix 19
AC1
A
489 498Right-handed alpha
Helix 20
AC2
A
502 513Right-handed alpha
Helix 21
AC3
A
517 529Right-handed alpha
Helix 22
AC4
A
560 565Right-handed alpha
Helix 23
AC5
A
570 579Right-handed alpha
Helix 24
AC6
A
582 587Right-handed alpha
Helix 25
AC7
A
604 620Right-handed alpha
Helix 26
AC8
A
642 653Right-handed alpha
Helix 27
AC9
A
654 665Right-handed alpha
Helix 28
AD1
A
672 680Right-handed alpha
Helix 29
AD2
A
693 705Right-handed alpha
Helix 30
AD3
A
721 736Right-handed alpha
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There are 8 sheets in PDB entry 7DHW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 48first strand
Strand 2
A
34 39anti-parallel
Strand 3
A
22 30anti-parallel
Strand 4
A
12 16anti-parallel
Strand 5
A
53 54anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 95first strand
Strand 2
A
98 102anti-parallel
Strand 3
A
623 630parallel
Strand 4
A
150 155parallel
Strand 5
A
428 434parallel
Strand 6
A
216 223anti-parallel
Strand 7
A
229 237anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 204first strand
Strand 2
A
212 213anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 336first strand
Strand 2
A
343 345anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
376 377first strand
Strand 2
A
384 385anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 536first strand
Strand 2
A
544 549anti-parallel
Strand 3
A
552 557anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
566 567first strand
Strand 2
A
602 603anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
668 671first strand
Strand 2
A
715 718anti-parallel
Strand 3
A
710 711anti-parallel
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