Analysis of interatomic Contacts of Structural Units in PDB entry:
7DIX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DIX entry

There are 4 chains in PDB entry 7DIX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 5ARG 507
B
 ARG 5ARG 507
A
 MSE 601MSE 601
B
 MSE 601MSE 601
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 7DIX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
24 29Right-handed alpha
Helix 3
AA3
A
29 38Right-handed alpha
Helix 4
AA4
A
39 42Right-handed 310
Helix 5
AA5
A
43 54Right-handed alpha
Helix 6
AA6
A
54 71Right-handed alpha
Helix 7
AA7
A
76 85Right-handed alpha
Helix 8
AA8
A
87 125Right-handed alpha
Helix 9
AA9
A
136 153Right-handed alpha
Helix 10
AB1
A
165 184Right-handed alpha
Helix 11
AB2
A
190 215Right-handed alpha
Helix 12
AB3
A
223 232Right-handed alpha
Helix 13
AB4
A
234 238Right-handed 310
Helix 14
AB5
A
240 255Right-handed alpha
Helix 15
AB6
A
260 267Right-handed alpha
Helix 16
AB7
A
275 292Right-handed alpha
Helix 17
AB8
A
293 296Right-handed 310
Helix 18
AB9
A
297 317Right-handed alpha
Helix 19
AC1
A
318 325Right-handed alpha
Helix 20
AC2
A
325 332Right-handed alpha
Helix 21
AC3
A
336 370Right-handed alpha
Helix 22
AC4
A
374 396Right-handed alpha
Helix 23
AC5
A
398 407Right-handed alpha
Helix 24
AC6
A
409 425Right-handed alpha
Helix 25
AC7
A
428 438Right-handed alpha
Helix 26
AC8
A
445 454Right-handed alpha
Helix 27
AC9
A
454 471Right-handed alpha
Helix 28
AD1
A
471 476Right-handed alpha
Helix 29
AD2
A
483 507Right-handed alpha
Helix 30
AD3
B
10 23Right-handed alpha
Helix 31
AD4
B
24 29Right-handed alpha
Helix 32
AD5
B
29 38Right-handed alpha
Helix 33
AD6
B
39 42Right-handed 310
Helix 34
AD7
B
43 54Right-handed alpha
Helix 35
AD8
B
54 71Right-handed alpha
Helix 36
AD9
B
76 85Right-handed alpha
Helix 37
AE1
B
87 125Right-handed alpha
Helix 38
AE2
B
136 153Right-handed alpha
Helix 39
AE3
B
165 184Right-handed alpha
Helix 40
AE4
B
190 215Right-handed alpha
Helix 41
AE5
B
223 232Right-handed alpha
Helix 42
AE6
B
234 238Right-handed 310
Helix 43
AE7
B
240 255Right-handed alpha
Helix 44
AE8
B
260 267Right-handed alpha
Helix 45
AE9
B
275 292Right-handed alpha
Helix 46
AF1
B
293 296Right-handed 310
Helix 47
AF2
B
297 307Right-handed alpha
Helix 48
AF3
B
307 318Right-handed alpha
Helix 49
AF4
B
318 325Right-handed alpha
Helix 50
AF5
B
325 333Right-handed alpha
Helix 51
AF6
B
336 370Right-handed alpha
Helix 52
AF7
B
374 396Right-handed alpha
Helix 53
AF8
B
398 407Right-handed alpha
Helix 54
AF9
B
409 425Right-handed alpha
Helix 55
AG1
B
428 438Right-handed alpha
Helix 56
AG2
B
447 454Right-handed alpha
Helix 57
AG3
B
454 477Right-handed alpha
Helix 58
AG4
B
483 507Right-handed alpha
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There are 2 sheets in PDB entry 7DIX. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 218first strand
Strand 2
A
221 222anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
217 218first strand
Strand 2
B
221 222anti-parallel
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