Analysis of interatomic Contacts of Structural Units in PDB entry:
7DJN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DJN entry

There are 2 chains in PDB entry 7DJN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4ALA 582
B
 LYS 4ALA 582
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 7DJN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 15Right-handed alpha
Helix 2
AA2
A
15 31Right-handed alpha
Helix 3
AA3
A
35 56Right-handed alpha
Helix 4
AA4
A
65 75Right-handed alpha
Helix 5
AA5
A
94 104Right-handed alpha
Helix 6
AA6
A
123 130Right-handed alpha
Helix 7
AA7
A
130 146Right-handed alpha
Helix 8
AA8
A
150 169Right-handed alpha
Helix 9
AA9
A
184 205Right-handed alpha
Helix 10
AB1
A
207 223Right-handed alpha
Helix 11
AB2
A
227 247Right-handed alpha
Helix 12
AB3
A
249 264Right-handed alpha
Helix 13
AB4
A
275 280Right-handed alpha
Helix 14
AB5
A
282 292Right-handed alpha
Helix 15
AB6
A
304 310Right-handed alpha
Helix 16
AB7
A
314 322Right-handed alpha
Helix 17
AB8
A
322 338Right-handed alpha
Helix 18
AB9
A
342 361Right-handed alpha
Helix 19
AC1
A
365 371Right-handed alpha
Helix 20
AC2
A
372 415Right-handed alpha
Helix 21
AC3
A
419 438Right-handed alpha
Helix 22
AC4
A
441 467Right-handed alpha
Helix 23
AC5
A
470 479Right-handed alpha
Helix 24
AC6
A
483 491Right-handed alpha
Helix 25
AC7
A
510 514Right-handed 310
Helix 26
AC8
A
517 536Right-handed alpha
Helix 27
AC9
A
542 560Right-handed alpha
Helix 28
AD1
A
571 581Right-handed alpha
Helix 29
AD2
B
6 15Right-handed alpha
Helix 30
AD3
B
15 31Right-handed alpha
Helix 31
AD4
B
35 56Right-handed alpha
Helix 32
AD5
B
65 76Right-handed alpha
Helix 33
AD6
B
97 104Right-handed alpha
Helix 34
AD7
B
119 130Right-handed alpha
Helix 35
AD8
B
130 144Right-handed alpha
Helix 36
AD9
B
150 169Right-handed alpha
Helix 37
AE1
B
174 205Right-handed alpha
Helix 38
AE2
B
207 223Right-handed alpha
Helix 39
AE3
B
227 247Right-handed alpha
Helix 40
AE4
B
249 265Right-handed alpha
Helix 41
AE5
B
282 292Right-handed alpha
Helix 42
AE6
B
305 310Right-handed alpha
Helix 43
AE7
B
314 322Right-handed alpha
Helix 44
AE8
B
322 337Right-handed alpha
Helix 45
AE9
B
342 361Right-handed alpha
Helix 46
AF1
B
365 371Right-handed alpha
Helix 47
AF2
B
372 415Right-handed alpha
Helix 48
AF3
B
419 438Right-handed alpha
Helix 49
AF4
B
441 442Right-handed 310
Helix 50
AF5
B
444 444Right-handed 310
Helix 51
AF6
B
445 467Right-handed alpha
Helix 52
AF7
B
470 480Right-handed alpha
Helix 53
AF8
B
483 491Right-handed alpha
Helix 54
AF9
B
510 515Right-handed 310
Helix 55
AG1
B
517 536Right-handed alpha
Helix 56
AG2
B
543 559Right-handed alpha
Helix 57
AG3
B
565 581Right-handed alpha
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There are no sheets in PDB entry 7DJN
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il