Analysis of interatomic Contacts of Structural Units in PDB entry:
7DJS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DJS entry

There are 4 chains in PDB entry 7DJS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 4ILE 253
B
 LEU 4ILE 253
C
 LEU 4ILE 253
D
 LYS 3ILE 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 7DJS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
17 30Right-handed alpha
Helix 2
AA2
A
40 54Right-handed alpha
Helix 3
AA3
A
67 83Right-handed alpha
Helix 4
AA4
A
100 104Right-handed 310
Helix 5
AA5
A
105 117Right-handed alpha
Helix 6
AA6
A
117 135Right-handed alpha
Helix 7
AA7
A
144 148Right-handed 310
Helix 8
AA8
A
154 175Right-handed alpha
Helix 9
AA9
A
176 178Right-handed 310
Helix 10
AB1
A
192 199Right-handed alpha
Helix 11
AB2
A
220 233Right-handed alpha
Helix 12
AB3
A
234 237Right-handed 310
Helix 13
AB4
A
249 253Right-handed 310
Helix 14
AB5
B
17 30Right-handed alpha
Helix 15
AB6
B
40 54Right-handed alpha
Helix 16
AB7
B
67 83Right-handed alpha
Helix 17
AB8
B
100 104Right-handed 310
Helix 18
AB9
B
105 117Right-handed alpha
Helix 19
AC1
B
117 135Right-handed alpha
Helix 20
AC2
B
144 148Right-handed 310
Helix 21
AC3
B
154 176Right-handed alpha
Helix 22
AC4
B
207 212Right-handed alpha
Helix 23
AC5
B
220 233Right-handed alpha
Helix 24
AC6
B
234 237Right-handed 310
Helix 25
AC7
B
249 253Right-handed 310
Helix 26
AC8
C
17 30Right-handed alpha
Helix 27
AC9
C
40 54Right-handed alpha
Helix 28
AD1
C
67 83Right-handed alpha
Helix 29
AD2
C
100 104Right-handed 310
Helix 30
AD3
C
105 117Right-handed alpha
Helix 31
AD4
C
117 134Right-handed alpha
Helix 32
AD5
C
144 148Right-handed 310
Helix 33
AD6
C
154 175Right-handed alpha
Helix 34
AD7
C
176 178Right-handed 310
Helix 35
AD8
C
220 233Right-handed alpha
Helix 36
AD9
C
234 237Right-handed 310
Helix 37
AE1
C
249 253Right-handed 310
Helix 38
AE2
D
17 30Right-handed alpha
Helix 39
AE3
D
40 54Right-handed alpha
Helix 40
AE4
D
67 83Right-handed alpha
Helix 41
AE5
D
100 104Right-handed 310
Helix 42
AE6
D
105 117Right-handed alpha
Helix 43
AE7
D
117 134Right-handed alpha
Helix 44
AE8
D
144 148Right-handed 310
Helix 45
AE9
D
154 175Right-handed alpha
Helix 46
AF1
D
176 178Right-handed 310
Helix 47
AF2
D
192 202Right-handed alpha
Helix 48
AF3
D
202 212Right-handed alpha
Helix 49
AF4
D
220 233Right-handed alpha
Helix 50
AF5
D
234 237Right-handed 310
Helix 51
AF6
D
249 253Right-handed 310
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There are 4 sheets in PDB entry 7DJS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 62first strand
Strand 2
A
33 38parallel
Strand 3
A
9 13parallel
Strand 4
A
87 90parallel
Strand 5
A
137 142parallel
Strand 6
A
180 187parallel
Strand 7
A
243 246parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 62first strand
Strand 2
B
33 38parallel
Strand 3
B
9 13parallel
Strand 4
B
87 90parallel
Strand 5
B
137 142parallel
Strand 6
B
180 187parallel
Strand 7
B
243 246parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 62first strand
Strand 2
C
33 38parallel
Strand 3
C
9 13parallel
Strand 4
C
87 90parallel
Strand 5
C
137 142parallel
Strand 6
C
180 187parallel
Strand 7
C
243 246parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
58 62first strand
Strand 2
D
33 38parallel
Strand 3
D
9 13parallel
Strand 4
D
87 90parallel
Strand 5
D
137 142parallel
Strand 6
D
180 187parallel
Strand 7
D
243 246parallel
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