Analysis of interatomic Contacts of Structural Units in PDB entry:
7DL0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DL0 entry

There are 2 chains in PDB entry 7DL0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 351
B
 MET 1HIS 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7DL0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 11Right-handed 310
Helix 2
AA2
A
49 61Right-handed alpha
Helix 3
AA3
A
68 84Right-handed alpha
Helix 4
AA4
A
125 129Right-handed 310
Helix 5
AA5
A
168 177Right-handed alpha
Helix 6
AA6
A
179 189Right-handed alpha
Helix 7
AA7
A
202 217Right-handed alpha
Helix 8
AA8
A
228 230Right-handed 310
Helix 9
AA9
A
231 238Right-handed alpha
Helix 10
AB1
A
250 262Right-handed alpha
Helix 11
AB2
A
279 285Right-handed alpha
Helix 12
AB3
A
301 312Right-handed alpha
Helix 13
AB4
A
327 339Right-handed alpha
Helix 14
AB5
A
339 351Right-handed alpha
Helix 15
AB6
B
9 11Right-handed 310
Helix 16
AB7
B
49 63Right-handed alpha
Helix 17
AB8
B
67 84Right-handed alpha
Helix 18
AB9
B
168 178Right-handed alpha
Helix 19
AC1
B
179 189Right-handed alpha
Helix 20
AC2
B
202 217Right-handed alpha
Helix 21
AC3
B
228 230Right-handed 310
Helix 22
AC4
B
231 238Right-handed alpha
Helix 23
AC5
B
250 262Right-handed alpha
Helix 24
AC6
B
279 285Right-handed alpha
Helix 25
AC7
B
301 312Right-handed alpha
Helix 26
AC8
B
327 339Right-handed alpha
Helix 27
AC9
B
339 351Right-handed alpha
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There are 7 sheets in PDB entry 7DL0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
26 27anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
145 155anti-parallel
Strand 3
A
136 140anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
145 155anti-parallel
Strand 3
A
38 47anti-parallel
Strand 4
A
96 104anti-parallel
Strand 5
A
119 122anti-parallel
Strand 6
A
160 162anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 245first strand
Strand 2
A
221 226parallel
Strand 3
A
194 198parallel
Strand 4
A
267 272parallel
Strand 5
A
287 295parallel
Strand 6
A
317 320parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 15first strand
Strand 2
B
26 27anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
131 140first strand
Strand 2
B
145 153anti-parallel
Strand 3
B
39 48anti-parallel
Strand 4
B
95 104anti-parallel
Strand 5
B
119 122anti-parallel
Strand 6
B
160 162anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
242 245first strand
Strand 2
B
221 226parallel
Strand 3
B
194 198parallel
Strand 4
B
267 272parallel
Strand 5
B
287 295parallel
Strand 6
B
317 320parallel
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