Analysis of interatomic Contacts of Structural Units in PDB entry:
7DL7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7DL7 entry

There are 8 chains in PDB entry 7DL7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	TYR 350
B	MET 1	TYR 350
C	MET 1	ALA 351
D	MET 1	TYR 350
E	MET 1	ALA 351
F	MET 1	ALA 351
G	MET 1	ALA 351
H	MET 1	TYR 350

There are108 helices in PDB entry 7DL7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	11	Right-handed 310
Helix 2	AA2	A	49	62	Right-handed alpha
Helix 3	AA3	A	67	84	Right-handed alpha
Helix 4	AA4	A	125	129	Right-handed 310
Helix 5	AA5	A	168	177	Right-handed alpha
Helix 6	AA6	A	179	189	Right-handed alpha
Helix 7	AA7	A	202	217	Right-handed alpha
Helix 8	AA8	A	228	230	Right-handed 310
Helix 9	AA9	A	231	238	Right-handed alpha
Helix 10	AB1	A	250	263	Right-handed alpha
Helix 11	AB2	A	279	286	Right-handed alpha
Helix 12	AB3	A	301	312	Right-handed alpha
Helix 13	AB4	A	327	339	Right-handed alpha
Helix 14	AB5	A	339	350	Right-handed alpha
Helix 15	AB6	B	9	11	Right-handed 310
Helix 16	AB7	B	49	62	Right-handed alpha
Helix 17	AB8	B	67	84	Right-handed alpha
Helix 18	AB9	B	168	177	Right-handed alpha
Helix 19	AC1	B	179	189	Right-handed alpha
Helix 20	AC2	B	202	217	Right-handed alpha
Helix 21	AC3	B	228	230	Right-handed 310
Helix 22	AC4	B	231	238	Right-handed alpha
Helix 23	AC5	B	250	263	Right-handed alpha
Helix 24	AC6	B	279	286	Right-handed alpha
Helix 25	AC7	B	301	312	Right-handed alpha
Helix 26	AC8	B	327	339	Right-handed alpha
Helix 27	AC9	B	339	350	Right-handed alpha
Helix 28	AD1	C	9	11	Right-handed 310
Helix 29	AD2	C	49	62	Right-handed alpha
Helix 30	AD3	C	67	84	Right-handed alpha
Helix 31	AD4	C	168	177	Right-handed alpha
Helix 32	AD5	C	179	189	Right-handed alpha
Helix 33	AD6	C	202	217	Right-handed alpha
Helix 34	AD7	C	228	230	Right-handed 310
Helix 35	AD8	C	231	238	Right-handed alpha
Helix 36	AD9	C	250	263	Right-handed alpha
Helix 37	AE1	C	279	286	Right-handed alpha
Helix 38	AE2	C	301	312	Right-handed alpha
Helix 39	AE3	C	327	339	Right-handed alpha
Helix 40	AE4	C	339	350	Right-handed alpha
Helix 41	AE5	D	9	11	Right-handed 310
Helix 42	AE6	D	49	64	Right-handed alpha
Helix 43	AE7	D	67	84	Right-handed alpha
Helix 44	AE8	D	168	177	Right-handed alpha
Helix 45	AE9	D	179	189	Right-handed alpha
Helix 46	AF1	D	202	217	Right-handed alpha
Helix 47	AF2	D	228	230	Right-handed 310
Helix 48	AF3	D	231	238	Right-handed alpha
Helix 49	AF4	D	250	263	Right-handed alpha
Helix 50	AF5	D	279	286	Right-handed alpha
Helix 51	AF6	D	301	312	Right-handed alpha
Helix 52	AF7	D	327	339	Right-handed alpha
Helix 53	AF8	D	339	350	Right-handed alpha
Helix 54	AF9	E	9	11	Right-handed 310
Helix 55	AG1	E	49	61	Right-handed alpha
Helix 56	AG2	E	68	84	Right-handed alpha
Helix 57	AG3	E	125	129	Right-handed 310
Helix 58	AG4	E	141	143	Right-handed 310
Helix 59	AG5	E	168	177	Right-handed alpha
Helix 60	AG6	E	179	189	Right-handed alpha
Helix 61	AG7	E	202	217	Right-handed alpha
Helix 62	AG8	E	228	230	Right-handed 310
Helix 63	AG9	E	231	238	Right-handed alpha
Helix 64	AH1	E	250	262	Right-handed alpha
Helix 65	AH2	E	279	286	Right-handed alpha
Helix 66	AH3	E	301	312	Right-handed alpha
Helix 67	AH4	E	327	339	Right-handed alpha
Helix 68	AH5	E	339	350	Right-handed alpha
Helix 69	AH6	F	9	11	Right-handed 310
Helix 70	AH7	F	49	62	Right-handed alpha
Helix 71	AH8	F	67	84	Right-handed alpha
Helix 72	AH9	F	168	177	Right-handed alpha
Helix 73	AI1	F	179	189	Right-handed alpha
Helix 74	AI2	F	202	217	Right-handed alpha
Helix 75	AI3	F	228	230	Right-handed 310
Helix 76	AI4	F	231	238	Right-handed alpha
Helix 77	AI5	F	250	263	Right-handed alpha
Helix 78	AI6	F	279	286	Right-handed alpha
Helix 79	AI7	F	301	312	Right-handed alpha
Helix 80	AI8	F	327	339	Right-handed alpha
Helix 81	AI9	F	339	351	Right-handed alpha
Helix 82	AJ1	G	9	11	Right-handed 310
Helix 83	AJ2	G	49	62	Right-handed alpha
Helix 84	AJ3	G	67	84	Right-handed alpha
Helix 85	AJ4	G	141	143	Right-handed 310
Helix 86	AJ5	G	168	177	Right-handed alpha
Helix 87	AJ6	G	179	189	Right-handed alpha
Helix 88	AJ7	G	202	217	Right-handed alpha
Helix 89	AJ8	G	228	230	Right-handed 310
Helix 90	AJ9	G	231	238	Right-handed alpha
Helix 91	AK1	G	250	262	Right-handed alpha
Helix 92	AK2	G	279	286	Right-handed alpha
Helix 93	AK3	G	301	312	Right-handed alpha
Helix 94	AK4	G	327	339	Right-handed alpha
Helix 95	AK5	G	339	350	Right-handed alpha
Helix 96	AK6	H	9	11	Right-handed 310
Helix 97	AK7	H	49	62	Right-handed alpha
Helix 98	AK8	H	67	84	Right-handed alpha
Helix 99	AK9	H	168	177	Right-handed alpha
Helix 100	AL1	H	179	189	Right-handed alpha
Helix 101	AL2	H	202	217	Right-handed alpha
Helix 102	AL3	H	228	230	Right-handed 310
Helix 103	AL4	H	231	238	Right-handed alpha
Helix 104	AL5	H	250	263	Right-handed alpha
Helix 105	AL6	H	279	285	Right-handed alpha
Helix 106	AL7	H	301	312	Right-handed alpha
Helix 107	AL8	H	327	339	Right-handed alpha
Helix 108	AL9	H	339	350	Right-handed alpha

There are 24 sheets in PDB entry 7DL7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	15	first strand
Strand 2	A	26	27	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	140	first strand
Strand 2	A	145	155	anti-parallel
Strand 3	A	38	48	anti-parallel
Strand 4	A	95	104	anti-parallel
Strand 5	A	119	122	anti-parallel
Strand 6	A	160	162	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	245	first strand
Strand 2	A	221	226	parallel
Strand 3	A	194	198	parallel
Strand 4	A	267	272	parallel
Strand 5	A	287	295	parallel
Strand 6	A	317	320	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	13	15	first strand
Strand 2	B	26	27	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	140	first strand
Strand 2	B	145	154	anti-parallel
Strand 3	B	39	48	anti-parallel
Strand 4	B	95	104	anti-parallel
Strand 5	B	119	122	anti-parallel
Strand 6	B	160	162	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	245	first strand
Strand 2	B	221	226	parallel
Strand 3	B	194	198	parallel
Strand 4	B	267	272	parallel
Strand 5	B	287	295	parallel
Strand 6	B	317	320	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	15	first strand
Strand 2	C	26	27	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	140	first strand
Strand 2	C	145	154	anti-parallel
Strand 3	C	39	48	anti-parallel
Strand 4	C	95	104	anti-parallel
Strand 5	C	119	122	anti-parallel
Strand 6	C	160	162	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	242	245	first strand
Strand 2	C	221	226	parallel
Strand 3	C	194	198	parallel
Strand 4	C	267	272	parallel
Strand 5	C	287	295	parallel
Strand 6	C	317	320	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	13	15	first strand
Strand 2	D	26	27	anti-parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	140	first strand
Strand 2	D	145	154	anti-parallel
Strand 3	D	39	48	anti-parallel
Strand 4	D	95	104	anti-parallel
Strand 5	D	119	122	anti-parallel
Strand 6	D	160	162	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	242	245	first strand
Strand 2	D	221	226	parallel
Strand 3	D	194	198	parallel
Strand 4	D	267	272	parallel
Strand 5	D	287	295	parallel
Strand 6	D	317	320	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	13	15	first strand
Strand 2	E	26	27	anti-parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	140	first strand
Strand 2	E	145	155	anti-parallel
Strand 3	E	38	48	anti-parallel
Strand 4	E	95	103	anti-parallel
Strand 5	E	119	122	anti-parallel
Strand 6	E	160	162	anti-parallel

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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	242	245	first strand
Strand 2	E	221	226	parallel
Strand 3	E	194	198	parallel
Strand 4	E	267	272	parallel
Strand 5	E	287	295	parallel
Strand 6	E	317	320	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	13	15	first strand
Strand 2	F	26	27	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	131	140	first strand
Strand 2	F	145	154	anti-parallel
Strand 3	F	39	48	anti-parallel
Strand 4	F	95	104	anti-parallel
Strand 5	F	119	122	anti-parallel
Strand 6	F	160	162	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	242	245	first strand
Strand 2	F	221	226	parallel
Strand 3	F	194	198	parallel
Strand 4	F	267	272	parallel
Strand 5	F	287	295	parallel
Strand 6	F	317	320	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	13	15	first strand
Strand 2	G	26	27	anti-parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	131	140	first strand
Strand 2	G	145	154	anti-parallel
Strand 3	G	39	48	anti-parallel
Strand 4	G	95	104	anti-parallel
Strand 5	G	119	122	anti-parallel
Strand 6	G	160	162	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	242	245	first strand
Strand 2	G	221	226	parallel
Strand 3	G	194	198	parallel
Strand 4	G	267	272	parallel
Strand 5	G	287	295	parallel
Strand 6	G	317	320	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	13	15	first strand
Strand 2	H	26	27	anti-parallel

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There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	131	140	first strand
Strand 2	H	145	154	anti-parallel
Strand 3	H	39	48	anti-parallel
Strand 4	H	95	103	anti-parallel
Strand 5	H	119	122	anti-parallel
Strand 6	H	160	162	anti-parallel

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There are 6 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	242	245	first strand
Strand 2	H	221	226	parallel
Strand 3	H	194	198	parallel
Strand 4	H	267	272	parallel
Strand 5	H	287	295	parallel
Strand 6	H	317	320	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7DL7

Analysis of interatomic Contacts of Structural Units in PDB entry:
7DL7