Analysis of interatomic Contacts of Structural Units in PDB entry:
7DLW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7DLW entry

There are 4 chains in PDB entry 7DLW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 15	ASP 442
B	ASN 13	ARG 445
C	ASN 14	ASP 442
D	ASN 14	ASP 442

There are 97 helices in PDB entry 7DLW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	24	Right-handed alpha
Helix 2	AA2	A	31	43	Right-handed alpha
Helix 3	AA3	A	65	71	Right-handed alpha
Helix 4	AA4	A	92	96	Right-handed alpha
Helix 5	AA5	A	103	118	Right-handed alpha
Helix 6	AA6	A	125	127	Right-handed 310
Helix 7	AA7	A	133	147	Right-handed alpha
Helix 8	AA8	A	162	167	Right-handed alpha
Helix 9	AA9	A	181	185	Right-handed 310
Helix 10	AB1	A	189	203	Right-handed alpha
Helix 11	AB2	A	224	239	Right-handed alpha
Helix 12	AB3	A	248	252	Right-handed 310
Helix 13	AB4	A	254	258	Right-handed 310
Helix 14	AB5	A	260	267	Right-handed alpha
Helix 15	AB6	A	270	275	Right-handed alpha
Helix 16	AB7	A	289	293	Right-handed 310
Helix 17	AB8	A	301	312	Right-handed alpha
Helix 18	AB9	A	313	315	Right-handed 310
Helix 19	AC1	A	318	331	Right-handed alpha
Helix 20	AC2	A	331	360	Right-handed alpha
Helix 21	AC3	A	378	381	Right-handed 310
Helix 22	AC4	A	385	399	Right-handed alpha
Helix 23	AC5	A	408	411	Right-handed 310
Helix 24	AC6	A	426	441	Right-handed alpha
Helix 25	AC7	B	19	24	Right-handed alpha
Helix 26	AC8	B	25	28	Right-handed 310
Helix 27	AC9	B	31	43	Right-handed alpha
Helix 28	AD1	B	65	76	Right-handed alpha
Helix 29	AD2	B	92	96	Right-handed alpha
Helix 30	AD3	B	103	118	Right-handed alpha
Helix 31	AD4	B	125	127	Right-handed 310
Helix 32	AD5	B	134	147	Right-handed alpha
Helix 33	AD6	B	162	167	Right-handed alpha
Helix 34	AD7	B	181	185	Right-handed 310
Helix 35	AD8	B	189	203	Right-handed alpha
Helix 36	AD9	B	224	239	Right-handed alpha
Helix 37	AE1	B	248	252	Right-handed 310
Helix 38	AE2	B	254	258	Right-handed 310
Helix 39	AE3	B	260	267	Right-handed alpha
Helix 40	AE4	B	270	275	Right-handed alpha
Helix 41	AE5	B	289	292	Right-handed 310
Helix 42	AE6	B	301	312	Right-handed alpha
Helix 43	AE7	B	313	316	Right-handed 310
Helix 44	AE8	B	318	331	Right-handed alpha
Helix 45	AE9	B	331	360	Right-handed alpha
Helix 46	AF1	B	378	381	Right-handed 310
Helix 47	AF2	B	385	399	Right-handed alpha
Helix 48	AF3	B	408	411	Right-handed 310
Helix 49	AF4	B	426	445	Right-handed alpha
Helix 50	AF5	C	19	24	Right-handed alpha
Helix 51	AF6	C	31	43	Right-handed alpha
Helix 52	AF7	C	66	71	Right-handed alpha
Helix 53	AF8	C	92	97	Right-handed alpha
Helix 54	AF9	C	103	119	Right-handed alpha
Helix 55	AG1	C	125	129	Right-handed 310
Helix 56	AG2	C	134	147	Right-handed alpha
Helix 57	AG3	C	162	167	Right-handed alpha
Helix 58	AG4	C	181	185	Right-handed 310
Helix 59	AG5	C	189	203	Right-handed alpha
Helix 60	AG6	C	224	239	Right-handed alpha
Helix 61	AG7	C	248	252	Right-handed 310
Helix 62	AG8	C	254	258	Right-handed 310
Helix 63	AG9	C	260	267	Right-handed alpha
Helix 64	AH1	C	270	275	Right-handed alpha
Helix 65	AH2	C	289	292	Right-handed 310
Helix 66	AH3	C	301	312	Right-handed alpha
Helix 67	AH4	C	313	316	Right-handed 310
Helix 68	AH5	C	318	331	Right-handed alpha
Helix 69	AH6	C	331	360	Right-handed alpha
Helix 70	AH7	C	378	381	Right-handed 310
Helix 71	AH8	C	385	399	Right-handed alpha
Helix 72	AH9	C	408	411	Right-handed 310
Helix 73	AI1	C	426	441	Right-handed alpha
Helix 74	AI2	D	19	24	Right-handed alpha
Helix 75	AI3	D	31	43	Right-handed alpha
Helix 76	AI4	D	65	74	Right-handed alpha
Helix 77	AI5	D	92	97	Right-handed alpha
Helix 78	AI6	D	103	118	Right-handed alpha
Helix 79	AI7	D	125	127	Right-handed 310
Helix 80	AI8	D	133	147	Right-handed alpha
Helix 81	AI9	D	162	167	Right-handed alpha
Helix 82	AJ1	D	181	185	Right-handed 310
Helix 83	AJ2	D	189	203	Right-handed alpha
Helix 84	AJ3	D	224	239	Right-handed alpha
Helix 85	AJ4	D	248	252	Right-handed 310
Helix 86	AJ5	D	254	258	Right-handed 310
Helix 87	AJ6	D	260	266	Right-handed alpha
Helix 88	AJ7	D	270	275	Right-handed alpha
Helix 89	AJ8	D	289	293	Right-handed 310
Helix 90	AJ9	D	301	312	Right-handed alpha
Helix 91	AK1	D	313	315	Right-handed 310
Helix 92	AK2	D	318	331	Right-handed alpha
Helix 93	AK3	D	331	360	Right-handed alpha
Helix 94	AK4	D	378	381	Right-handed 310
Helix 95	AK5	D	385	399	Right-handed alpha
Helix 96	AK6	D	408	411	Right-handed 310
Helix 97	AK7	D	426	441	Right-handed alpha

There are 12 sheets in PDB entry 7DLW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	55	56	first strand
Strand 2	A	402	403	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	132	first strand
Strand 2	A	295	299	anti-parallel
Strand 3	A	277	282	anti-parallel
Strand 4	A	241	245	parallel
Strand 5	A	207	213	parallel
Strand 6	A	152	156	parallel
Strand 7	A	174	178	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	363	364	first strand
Strand 2	A	372	376	anti-parallel
Strand 3	A	417	421	anti-parallel
Strand 4	A	405	406	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	55	56	first strand
Strand 2	B	402	403	parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	129	133	first strand
Strand 2	B	294	299	anti-parallel
Strand 3	B	277	282	anti-parallel
Strand 4	B	241	245	parallel
Strand 5	B	207	213	parallel
Strand 6	B	152	156	parallel
Strand 7	B	174	178	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	363	364	first strand
Strand 2	B	372	376	anti-parallel
Strand 3	B	417	421	anti-parallel
Strand 4	B	405	406	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	55	56	first strand
Strand 2	C	402	403	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	130	133	first strand
Strand 2	C	294	299	anti-parallel
Strand 3	C	277	282	anti-parallel
Strand 4	C	241	245	parallel
Strand 5	C	207	213	parallel
Strand 6	C	152	156	parallel
Strand 7	C	174	178	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	372	376	first strand
Strand 2	C	417	421	anti-parallel
Strand 3	C	405	406	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	55	56	first strand
Strand 2	D	402	403	parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	129	132	first strand
Strand 2	D	295	299	anti-parallel
Strand 3	D	277	282	anti-parallel
Strand 4	D	241	245	parallel
Strand 5	D	207	213	parallel
Strand 6	D	152	156	parallel
Strand 7	D	174	178	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	372	376	first strand
Strand 2	D	417	421	anti-parallel
Strand 3	D	405	406	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7DLW

Analysis of interatomic Contacts of Structural Units in PDB entry:
7DLW