Analysis of interatomic Contacts of Structural Units in PDB entry:
7DLY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DLY entry

There are 2 chains in PDB entry 7DLY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 15ARG 444
B
 ASN 12ARG 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 7DLY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
31 43Right-handed alpha
Helix 2
AA2
A
65 74Right-handed alpha
Helix 3
AA3
A
106 119Right-handed alpha
Helix 4
AA4
A
134 147Right-handed alpha
Helix 5
AA5
A
162 167Right-handed alpha
Helix 6
AA6
A
181 185Right-handed 310
Helix 7
AA7
A
189 203Right-handed alpha
Helix 8
AA8
A
224 239Right-handed alpha
Helix 9
AA9
A
254 258Right-handed 310
Helix 10
AB1
A
270 275Right-handed alpha
Helix 11
AB2
A
283 287Right-handed alpha
Helix 12
AB3
A
301 313Right-handed alpha
Helix 13
AB4
A
314 316Right-handed 310
Helix 14
AB5
A
318 331Right-handed alpha
Helix 15
AB6
A
331 359Right-handed alpha
Helix 16
AB7
A
378 381Right-handed 310
Helix 17
AB8
A
385 399Right-handed alpha
Helix 18
AB9
A
426 442Right-handed alpha
Helix 19
AC1
B
31 43Right-handed alpha
Helix 20
AC2
B
65 71Right-handed alpha
Helix 21
AC3
B
106 119Right-handed alpha
Helix 22
AC4
B
125 127Right-handed 310
Helix 23
AC5
B
134 147Right-handed alpha
Helix 24
AC6
B
162 167Right-handed alpha
Helix 25
AC7
B
181 185Right-handed 310
Helix 26
AC8
B
189 203Right-handed alpha
Helix 27
AC9
B
224 239Right-handed alpha
Helix 28
AD1
B
254 258Right-handed 310
Helix 29
AD2
B
270 275Right-handed alpha
Helix 30
AD3
B
283 287Right-handed alpha
Helix 31
AD4
B
289 293Right-handed 310
Helix 32
AD5
B
301 313Right-handed alpha
Helix 33
AD6
B
314 316Right-handed 310
Helix 34
AD7
B
318 331Right-handed alpha
Helix 35
AD8
B
331 359Right-handed alpha
Helix 36
AD9
B
378 381Right-handed 310
Helix 37
AE1
B
385 399Right-handed alpha
Helix 38
AE2
B
426 442Right-handed alpha
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There are 4 sheets in PDB entry 7DLY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
402 406parallel
Strand 3
A
417 421anti-parallel
Strand 4
A
372 376anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 132first strand
Strand 2
A
295 299anti-parallel
Strand 3
A
277 282anti-parallel
Strand 4
A
241 245parallel
Strand 5
A
207 213parallel
Strand 6
A
152 156parallel
Strand 7
A
174 178parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
55 57first strand
Strand 2
B
402 406parallel
Strand 3
B
417 421anti-parallel
Strand 4
B
372 376anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 132first strand
Strand 2
B
295 299anti-parallel
Strand 3
B
277 282anti-parallel
Strand 4
B
241 245parallel
Strand 5
B
207 213parallel
Strand 6
B
152 156parallel
Strand 7
B
174 178parallel
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