Analysis of interatomic Contacts of Structural Units in PDB entry:
7DN4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DN4 entry

There are 6 chains in PDB entry 7DN4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2794HIS 2911
B
 ASP 2794HIS 2911
C
 ASP 2794HIS 2911
D
 ASP 2794HIS 2911
E
 ASP 2794HIS 2911
F
 ASP 2794HIS 2911
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 7DN4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2794 2799Right-handed alpha
Helix 2
AA2
A
2803 2819Right-handed alpha
Helix 3
AA3
A
2820 2824Right-handed 310
Helix 4
AA4
A
2837 2842Right-handed alpha
Helix 5
AA5
A
2847 2857Right-handed alpha
Helix 6
AA6
A
2862 2881Right-handed alpha
Helix 7
AA7
A
2885 2911Right-handed alpha
Helix 8
AA8
B
2795 2800Right-handed alpha
Helix 9
AA9
B
2803 2820Right-handed alpha
Helix 10
AB1
B
2823 2827Right-handed 310
Helix 11
AB2
B
2837 2842Right-handed alpha
Helix 12
AB3
B
2847 2857Right-handed alpha
Helix 13
AB4
B
2862 2881Right-handed alpha
Helix 14
AB5
B
2885 2911Right-handed alpha
Helix 15
AB6
C
2795 2800Right-handed alpha
Helix 16
AB7
C
2803 2819Right-handed alpha
Helix 17
AB8
C
2823 2827Right-handed 310
Helix 18
AB9
C
2837 2842Right-handed alpha
Helix 19
AC1
C
2847 2857Right-handed alpha
Helix 20
AC2
C
2862 2881Right-handed alpha
Helix 21
AC3
C
2885 2908Right-handed alpha
Helix 22
AC4
D
2803 2820Right-handed alpha
Helix 23
AC5
D
2823 2827Right-handed 310
Helix 24
AC6
D
2837 2842Right-handed alpha
Helix 25
AC7
D
2848 2857Right-handed alpha
Helix 26
AC8
D
2862 2881Right-handed alpha
Helix 27
AC9
D
2885 2911Right-handed alpha
Helix 28
AD1
E
2795 2799Right-handed alpha
Helix 29
AD2
E
2805 2820Right-handed alpha
Helix 30
AD3
E
2821 2827Right-handed 310
Helix 31
AD4
E
2837 2842Right-handed alpha
Helix 32
AD5
E
2847 2858Right-handed alpha
Helix 33
AD6
E
2862 2881Right-handed alpha
Helix 34
AD7
E
2885 2904Right-handed alpha
Helix 35
AD8
F
2795 2800Right-handed alpha
Helix 36
AD9
F
2803 2820Right-handed alpha
Helix 37
AE1
F
2821 2824Right-handed 310
Helix 38
AE2
F
2837 2842Right-handed alpha
Helix 39
AE3
F
2847 2857Right-handed alpha
Helix 40
AE4
F
2862 2881Right-handed alpha
Helix 41
AE5
F
2885 2911Right-handed alpha
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There are no sheets in PDB entry 7DN4
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