Analysis of interatomic Contacts of Structural Units in PDB entry:
7DOL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DOL entry

There are 2 chains in PDB entry 7DOL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 85ILE 725
C
 A 4 A 9
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 7DOL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
183 186Right-handed 310
Helix 2
AA2
A
223 235Right-handed alpha
Helix 3
AA3
A
242 251Right-handed alpha
Helix 4
AA4
A
255 261Right-handed 310
Helix 5
AA5
A
304 309Right-handed alpha
Helix 6
AA6
A
313 323Right-handed alpha
Helix 7
AA7
A
329 331Right-handed 310
Helix 8
AA8
A
338 343Right-handed alpha
Helix 9
AA9
A
387 395Right-handed alpha
Helix 10
AB1
A
403 428Right-handed alpha
Helix 11
AB2
A
456 480Right-handed alpha
Helix 12
AB3
A
493 506Right-handed alpha
Helix 13
AB4
A
520 530Right-handed alpha
Helix 14
AB5
A
536 549Right-handed alpha
Helix 15
AB6
A
577 591Right-handed alpha
Helix 16
AB7
A
593 597Right-handed 310
Helix 17
AB8
A
598 640Right-handed alpha
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There are 7 sheets in PDB entry 7DOL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 170first strand
Strand 2
A
151 156anti-parallel
Strand 3
A
194 204anti-parallel
Strand 4
A
209 220anti-parallel
Strand 5
A
178 181parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
265 266first strand
Strand 2
A
369 380parallel
Strand 3
A
353 364anti-parallel
Strand 4
A
295 303anti-parallel
Strand 5
A
285 292anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 276first strand
Strand 2
A
383 386parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
326 328first strand
Strand 2
A
332 334anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 441first strand
Strand 2
A
447 452anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
486 488first strand
Strand 2
A
552 554anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
646 653first strand
Strand 2
A
659 663anti-parallel
Strand 3
A
669 672anti-parallel
Strand 4
A
719 724parallel
Strand 5
A
705 714anti-parallel
Strand 6
A
646 653anti-parallel
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