Analysis of interatomic Contacts of Structural Units in PDB entry:
7DQK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DQK entry

There are 2 chains in PDB entry 7DQK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 18LEU 493
B
 ALA 15LEU 493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 47 helices in PDB entry 7DQK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 30Right-handed alpha
Helix 2
AA2
A
34 77Right-handed alpha
Helix 3
AA3
A
79 92Right-handed alpha
Helix 4
AA4
A
93 105Right-handed alpha
Helix 5
AA5
A
106 118Right-handed alpha
Helix 6
AA6
A
120 122Right-handed 310
Helix 7
AA7
A
123 139Right-handed alpha
Helix 8
AA8
A
140 148Right-handed alpha
Helix 9
AA9
A
148 156Right-handed alpha
Helix 10
AB1
A
159 172Right-handed alpha
Helix 11
AB2
A
173 193Right-handed alpha
Helix 12
AB3
A
196 220Right-handed alpha
Helix 13
AB4
A
223 250Right-handed alpha
Helix 14
AB5
A
261 266Right-handed 310
Helix 15
AB6
A
267 299Right-handed alpha
Helix 16
AB7
A
301 340Right-handed alpha
Helix 17
AB8
A
342 371Right-handed alpha
Helix 18
AB9
A
373 380Right-handed alpha
Helix 19
AC1
A
382 403Right-handed alpha
Helix 20
AC2
A
405 416Right-handed alpha
Helix 21
AC3
A
418 431Right-handed alpha
Helix 22
AC4
A
433 443Right-handed alpha
Helix 23
AC5
A
448 473Right-handed alpha
Helix 24
AC6
A
475 493Right-handed alpha
Helix 25
AC7
B
23 31Right-handed alpha
Helix 26
AC8
B
34 78Right-handed alpha
Helix 27
AC9
B
79 93Right-handed alpha
Helix 28
AD1
B
93 118Right-handed alpha
Helix 29
AD2
B
121 148Right-handed alpha
Helix 30
AD3
B
148 157Right-handed alpha
Helix 31
AD4
B
159 172Right-handed alpha
Helix 32
AD5
B
174 193Right-handed alpha
Helix 33
AD6
B
196 220Right-handed alpha
Helix 34
AD7
B
224 247Right-handed alpha
Helix 35
AD8
B
250 254Right-handed 310
Helix 36
AD9
B
261 266Right-handed 310
Helix 37
AE1
B
267 278Right-handed alpha
Helix 38
AE2
B
278 297Right-handed alpha
Helix 39
AE3
B
304 340Right-handed alpha
Helix 40
AE4
B
342 371Right-handed alpha
Helix 41
AE5
B
374 380Right-handed alpha
Helix 42
AE6
B
382 403Right-handed alpha
Helix 43
AE7
B
405 417Right-handed alpha
Helix 44
AE8
B
418 431Right-handed alpha
Helix 45
AE9
B
433 443Right-handed alpha
Helix 46
AF1
B
448 474Right-handed alpha
Helix 47
AF2
B
475 493Right-handed alpha
Back to top of page
There are no sheets in PDB entry 7DQK
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il