Analysis of interatomic Contacts of Structural Units in PDB entry:
7DQV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DQV entry

There is 1 chain in PDB entry 7DQV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 101ALA 689
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7DQV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
101 133Right-handed alpha
Helix 2
AA2
A
133 145Right-handed alpha
Helix 3
AA3
A
146 151Right-handed alpha
Helix 4
AA4
A
156 164Right-handed alpha
Helix 5
AA5
A
164 205Right-handed alpha
Helix 6
AA6
A
208 214Right-handed alpha
Helix 7
AA7
A
218 237Right-handed alpha
Helix 8
AA8
A
237 258Right-handed alpha
Helix 9
AA9
A
264 268Right-handed 310
Helix 10
AB1
A
272 287Right-handed alpha
Helix 11
AB2
A
288 307Right-handed alpha
Helix 12
AB3
A
308 315Right-handed alpha
Helix 13
AB4
A
317 367Right-handed alpha
Helix 14
AB5
A
374 379Right-handed alpha
Helix 15
AB6
A
379 398Right-handed alpha
Helix 16
AB7
A
399 419Right-handed alpha
Helix 17
AB8
A
483 492Right-handed alpha
Helix 18
AB9
A
513 515Right-handed 310
Helix 19
AC1
A
516 522Right-handed alpha
Helix 20
AC2
A
537 544Right-handed alpha
Helix 21
AC3
A
550 561Right-handed alpha
Helix 22
AC4
A
563 570Right-handed alpha
Helix 23
AC5
A
572 576Right-handed 310
Helix 24
AC6
A
579 583Right-handed 310
Helix 25
AC7
A
586 600Right-handed alpha
Helix 26
AC8
A
616 635Right-handed alpha
Helix 27
AC9
A
644 649Right-handed alpha
Helix 28
AD1
A
667 673Right-handed alpha
Helix 29
AD2
A
678 689Right-handed alpha
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There are 2 sheets in PDB entry 7DQV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
459 469first strand
Strand 2
A
442 451anti-parallel
Strand 3
A
504 507anti-parallel
Strand 4
A
510 511anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
524 527first strand
Strand 2
A
605 609parallel
Strand 3
A
637 641parallel
Strand 4
A
473 477parallel
Strand 5
A
653 658parallel
Strand 6
A
661 666anti-parallel
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