Analysis of interatomic Contacts of Structural Units in PDB entry:
7DR0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7DR0 entry

There are 11 chains in PDB entry 7DR0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 14	GLY 752
B	GLY 2	PHE 736
C	ALA 2	TYR 81
D	THR 78	SER 216
E	MET 1	GLU 62
F	ASP 26	ARG 186
I	ASN 4	GLU 33
J	PHE 3	PRO 39
K	VAL 99	ILE 155
L	ILE 15	ILE 145
M	LEU 2	LYS 30

There are 87 helices in PDB entry 7DR0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	26	31	Right-handed alpha
Helix 2	AA2	A	46	55	Right-handed alpha
Helix 3	AA3	A	65	97	Right-handed alpha
Helix 4	AA4	A	100	105	Right-handed alpha
Helix 5	AA5	A	123	127	Right-handed 310
Helix 6	AA6	A	143	151	Right-handed alpha
Helix 7	AA7	A	155	183	Right-handed alpha
Helix 8	AA8	A	187	192	Right-handed alpha
Helix 9	AA9	A	193	204	Right-handed alpha
Helix 10	AB1	A	206	220	Right-handed alpha
Helix 11	AB2	A	220	229	Right-handed alpha
Helix 12	AB3	A	241	246	Right-handed alpha
Helix 13	AB4	A	256	260	Right-handed 310
Helix 14	AB5	A	261	266	Right-handed alpha
Helix 15	AB6	A	268	273	Right-handed 310
Helix 16	AB7	A	290	309	Right-handed alpha
Helix 17	AB8	A	321	327	Right-handed alpha
Helix 18	AB9	A	340	346	Right-handed alpha
Helix 19	AC1	A	348	373	Right-handed alpha
Helix 20	AC2	A	383	416	Right-handed alpha
Helix 21	AC3	A	433	465	Right-handed alpha
Helix 22	AC4	A	481	486	Right-handed alpha
Helix 23	AC5	A	486	493	Right-handed alpha
Helix 24	AC6	A	529	556	Right-handed alpha
Helix 25	AC7	A	565	570	Right-handed alpha
Helix 26	AC8	A	587	618	Right-handed alpha
Helix 27	AC9	A	635	640	Right-handed alpha
Helix 28	AD1	A	642	649	Right-handed alpha
Helix 29	AD2	A	666	688	Right-handed alpha
Helix 30	AD3	A	690	707	Right-handed alpha
Helix 31	AD4	A	720	752	Right-handed alpha
Helix 32	AD5	B	9	14	Right-handed alpha
Helix 33	AD6	B	18	27	Right-handed alpha
Helix 34	AD7	B	38	72	Right-handed alpha
Helix 35	AD8	B	73	79	Right-handed alpha
Helix 36	AD9	B	97	105	Right-handed alpha
Helix 37	AE1	B	119	127	Right-handed alpha
Helix 38	AE2	B	131	156	Right-handed alpha
Helix 39	AE3	B	164	169	Right-handed alpha
Helix 40	AE4	B	171	181	Right-handed alpha
Helix 41	AE5	B	184	197	Right-handed alpha
Helix 42	AE6	B	197	202	Right-handed alpha
Helix 43	AE7	B	222	227	Right-handed alpha
Helix 44	AE8	B	229	235	Right-handed 310
Helix 45	AE9	B	269	288	Right-handed alpha
Helix 46	AF1	B	322	327	Right-handed alpha
Helix 47	AF2	B	329	355	Right-handed alpha
Helix 48	AF3	B	364	397	Right-handed alpha
Helix 49	AF4	B	407	412	Right-handed alpha
Helix 50	AF5	B	414	446	Right-handed alpha
Helix 51	AF6	B	448	452	Right-handed 310
Helix 52	AF7	B	457	468	Right-handed alpha
Helix 53	AF8	B	483	488	Right-handed alpha
Helix 54	AF9	B	496	501	Right-handed alpha
Helix 55	AG1	B	516	543	Right-handed alpha
Helix 56	AG2	B	575	605	Right-handed alpha
Helix 57	AG3	B	609	616	Right-handed alpha
Helix 58	AG4	B	618	625	Right-handed alpha
Helix 59	AG5	B	631	636	Right-handed alpha
Helix 60	AG6	B	646	669	Right-handed alpha
Helix 61	AG7	B	670	687	Right-handed alpha
Helix 62	AG8	B	704	734	Right-handed alpha
Helix 63	AG9	C	15	20	Right-handed alpha
Helix 64	AH1	C	44	48	Right-handed 310
Helix 65	AH2	C	52	57	Right-handed alpha
Helix 66	AH3	D	97	102	Right-handed alpha
Helix 67	AH4	D	138	152	Right-handed alpha
Helix 68	AH5	E	54	58	Right-handed 310
Helix 69	AH6	F	36	55	Right-handed alpha
Helix 70	AH7	F	61	83	Right-handed alpha
Helix 71	AH8	F	108	135	Right-handed alpha
Helix 72	AH9	F	140	145	Right-handed alpha
Helix 73	AI1	F	147	157	Right-handed alpha
Helix 74	AI2	F	160	172	Right-handed alpha
Helix 75	AI3	I	5	15	Right-handed alpha
Helix 76	AI4	I	15	31	Right-handed alpha
Helix 77	AI5	J	4	8	Right-handed alpha
Helix 78	AI6	J	9	32	Right-handed alpha
Helix 79	AI7	K	100	110	Right-handed alpha
Helix 80	AI8	K	133	155	Right-handed alpha
Helix 81	AI9	L	25	33	Right-handed alpha
Helix 82	AJ1	L	43	60	Right-handed alpha
Helix 83	AJ2	L	60	66	Right-handed alpha
Helix 84	AJ3	L	74	102	Right-handed alpha
Helix 85	AJ4	L	119	144	Right-handed alpha
Helix 86	AJ5	M	3	14	Right-handed alpha
Helix 87	AJ6	M	14	29	Right-handed alpha

There are 11 sheets in PDB entry 7DR0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	19	first strand
Strand 2	A	184	186	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	115	first strand
Strand 2	A	135	139	anti-parallel
Strand 3	A	129	132	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	515	517	first strand
Strand 2	A	520	523	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	620	622	first strand
Strand 2	A	628	630	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	87	90	first strand
Strand 2	B	113	115	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	454	455	first strand
Strand 2	F	94	96	parallel
Strand 3	F	87	88	anti-parallel
Strand 4	F	31	32	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	638	639	first strand
Strand 2	B	642	643	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	65	68	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	38	41	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	132	136	first strand
Strand 2	D	105	109	anti-parallel
Strand 3	D	159	162	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	7	9	first strand
Strand 2	E	21	26	anti-parallel
Strand 3	E	36	39	anti-parallel
Strand 4	E	50	53	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7DR0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7DR0