Analysis of interatomic Contacts of Structural Units in PDB entry:
7DRC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7DRC entry

There are 3 chains in PDB entry 7DRC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 20	ASN 241
C	LEU 29	CYS 934
B	ASN 29	ILE 204

There are 36 helices in PDB entry 7DRC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	46	Right-handed 310
Helix 2	AA2	A	93	97	Right-handed 310
Helix 3	AA3	A	195	205	Right-handed alpha
Helix 4	AA4	C	31	45	Right-handed alpha
Helix 5	AA5	C	58	62	Right-handed 310
Helix 6	AA6	C	105	111	Right-handed 310
Helix 7	AA7	C	130	136	Right-handed 310
Helix 8	AA8	C	154	160	Right-handed 310
Helix 9	AA9	C	201	207	Right-handed alpha
Helix 10	AB1	C	228	234	Right-handed alpha
Helix 11	AB2	C	256	263	Right-handed 310
Helix 12	AB3	C	281	285	Right-handed 310
Helix 13	AB4	C	328	336	Right-handed alpha
Helix 14	AB5	C	337	340	Right-handed 310
Helix 15	AB6	C	360	363	Right-handed 310
Helix 16	AB7	C	406	410	Right-handed 310
Helix 17	AB8	C	428	434	Right-handed 310
Helix 18	AB9	C	451	457	Right-handed 310
Helix 19	AC1	C	475	480	Right-handed 310
Helix 20	AC2	C	617	621	Right-handed 310
Helix 21	AC3	C	666	672	Right-handed 310
Helix 22	AC4	C	714	719	Right-handed alpha
Helix 23	AC5	C	738	745	Right-handed 310
Helix 24	AC6	C	764	768	Right-handed 310
Helix 25	AC7	C	835	839	Right-handed 310
Helix 26	AC8	C	861	865	Right-handed 310
Helix 27	AC9	C	883	889	Right-handed 310
Helix 28	AD1	C	911	915	Right-handed 310
Helix 29	AD2	C	916	920	Right-handed 310
Helix 30	AD3	B	30	42	Right-handed alpha
Helix 31	AD4	B	88	94	Right-handed 310
Helix 32	AD5	B	112	118	Right-handed 310
Helix 33	AD6	B	136	142	Right-handed 310
Helix 34	AD7	B	161	166	Right-handed 310
Helix 35	AD8	B	186	192	Right-handed 310
Helix 36	AD9	B	193	197	Right-handed 310

There are 17 sheets in PDB entry 7DRC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	30	first strand
Strand 2	A	34	37	anti-parallel
Strand 3	A	85	87	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	59	first strand
Strand 2	A	62	72	anti-parallel
Strand 3	A	226	238	anti-parallel
Strand 4	A	101	109	anti-parallel
Strand 5	A	190	194	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	161	first strand
Strand 2	A	166	174	anti-parallel
Strand 3	A	177	184	anti-parallel
Strand 4	A	135	144	parallel
Strand 5	A	117	126	anti-parallel
Strand 6	A	213	221	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	147	149	first strand
Strand 2	C	94	96	anti-parallel
Strand 3	C	89	90	anti-parallel

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There are 17 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	70	72	first strand
Strand 2	C	79	83	anti-parallel
Strand 3	C	116	118	parallel
Strand 4	C	142	143	parallel
Strand 5	C	165	167	parallel
Strand 6	C	189	191	parallel
Strand 7	C	214	216	parallel
Strand 8	C	242	244	parallel
Strand 9	C	268	270	parallel
Strand 10	C	292	294	parallel
Strand 11	C	317	319	parallel
Strand 12	C	345	347	parallel
Strand 13	C	368	370	parallel
Strand 14	C	392	394	parallel
Strand 15	C	415	417	parallel
Strand 16	C	439	441	parallel
Strand 17	C	462	464	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	150	152	first strand
Strand 2	C	172	174	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	357	358	first strand
Strand 2	C	380	381	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	424	426	first strand
Strand 2	C	446	449	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	471	474	first strand
Strand 2	C	494	497	parallel

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There are 15 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	487	489	first strand
Strand 2	C	511	513	parallel
Strand 3	C	535	537	parallel
Strand 4	C	560	562	parallel
Strand 5	C	584	586	parallel
Strand 6	C	605	607	parallel
Strand 7	C	629	631	parallel
Strand 8	C	653	655	parallel
Strand 9	C	677	679	parallel
Strand 10	C	700	702	parallel
Strand 11	C	725	727	parallel
Strand 12	C	749	751	parallel
Strand 13	C	822	824	parallel
Strand 14	C	847	848	parallel
Strand 15	C	871	872	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	569	570	first strand
Strand 2	C	591	594	parallel
Strand 3	C	612	615	parallel
Strand 4	C	636	640	parallel
Strand 5	C	660	663	parallel
Strand 6	C	684	685	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	782	789	first strand
Strand 2	C	792	797	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	802	806	first strand
Strand 2	C	809	813	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	831	832	first strand
Strand 2	C	853	856	parallel
Strand 3	C	877	878	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	903	904	first strand
Strand 2	C	925	926	parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	66	first strand
Strand 2	B	75	77	anti-parallel
Strand 3	B	100	101	parallel
Strand 4	B	123	125	parallel
Strand 5	B	147	149	parallel
Strand 6	B	171	173	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	106	107	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7DRC

Analysis of interatomic Contacts of Structural Units in PDB entry:
7DRC