Analysis of interatomic Contacts of Structural Units in PDB entry:
7DRG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DRG entry

There are 2 chains in PDB entry 7DRG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4LEU 362
B
 GLU 2LEU 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7DRG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 14Right-handed alpha
Helix 2
AA2
A
51 70Right-handed alpha
Helix 3
AA3
A
91 93Right-handed 310
Helix 4
AA4
A
95 102Right-handed alpha
Helix 5
AA5
A
133 139Right-handed alpha
Helix 6
AA6
A
151 158Right-handed alpha
Helix 7
AA7
A
160 174Right-handed alpha
Helix 8
AA8
A
197 205Right-handed alpha
Helix 9
AA9
A
212 217Right-handed alpha
Helix 10
AB1
A
219 223Right-handed 310
Helix 11
AB2
A
238 244Right-handed alpha
Helix 12
AB3
A
246 254Right-handed alpha
Helix 13
AB4
A
287 298Right-handed alpha
Helix 14
AB5
A
299 301Right-handed 310
Helix 15
AB6
A
317 328Right-handed alpha
Helix 16
AB7
A
334 336Right-handed 310
Helix 17
AB8
A
337 349Right-handed alpha
Helix 18
AB9
B
3 14Right-handed alpha
Helix 19
AC1
B
51 70Right-handed alpha
Helix 20
AC2
B
91 93Right-handed 310
Helix 21
AC3
B
95 102Right-handed alpha
Helix 22
AC4
B
133 140Right-handed alpha
Helix 23
AC5
B
152 158Right-handed alpha
Helix 24
AC6
B
160 174Right-handed alpha
Helix 25
AC7
B
190 205Right-handed alpha
Helix 26
AC8
B
212 217Right-handed alpha
Helix 27
AC9
B
219 223Right-handed 310
Helix 28
AD1
B
238 244Right-handed alpha
Helix 29
AD2
B
246 252Right-handed alpha
Helix 30
AD3
B
287 298Right-handed alpha
Helix 31
AD4
B
299 301Right-handed 310
Helix 32
AD5
B
320 329Right-handed alpha
Helix 33
AD6
B
334 336Right-handed 310
Helix 34
AD7
B
337 349Right-handed alpha
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There are 4 sheets in PDB entry 7DRG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 22first strand
Strand 2
A
33 47anti-parallel
Strand 3
A
143 150anti-parallel
Strand 4
A
126 131anti-parallel
Strand 5
A
109 114anti-parallel
Strand 6
A
75 77anti-parallel
Strand 7
A
87 89anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 22first strand
Strand 2
A
33 47anti-parallel
Strand 3
A
177 186anti-parallel
Strand 4
A
233 237anti-parallel
Strand 5
A
267 272anti-parallel
Strand 6
A
259 264anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 22first strand
Strand 2
B
31 46anti-parallel
Strand 3
B
144 151anti-parallel
Strand 4
B
126 131anti-parallel
Strand 5
B
109 114anti-parallel
Strand 6
B
75 77anti-parallel
Strand 7
B
87 89anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
19 22first strand
Strand 2
B
31 46anti-parallel
Strand 3
B
177 186anti-parallel
Strand 4
B
233 237anti-parallel
Strand 5
B
267 272anti-parallel
Strand 6
B
259 264anti-parallel
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