Analysis of interatomic Contacts of Structural Units in PDB entry:
7DRI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7DRI entry

There are 4 chains in PDB entry 7DRI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 331	GLU 801
B	GLU 334	ASP 799
C	GLY 333	VAL 800
D	GLY 333	GLU 801

There are105 helices in PDB entry 7DRI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	337	349	Right-handed alpha
Helix 2	AA2	A	359	372	Right-handed alpha
Helix 3	AA3	A	377	396	Right-handed alpha
Helix 4	AA4	A	403	414	Right-handed alpha
Helix 5	AA5	A	415	419	Right-handed 310
Helix 6	AA6	A	423	442	Right-handed alpha
Helix 7	AA7	A	457	461	Right-handed 310
Helix 8	AA8	A	462	476	Right-handed alpha
Helix 9	AA9	A	477	479	Right-handed 310
Helix 10	AB1	A	480	494	Right-handed alpha
Helix 11	AB2	A	497	524	Right-handed alpha
Helix 12	AB3	A	530	541	Right-handed alpha
Helix 13	AB4	A	571	582	Right-handed alpha
Helix 14	AB5	A	591	602	Right-handed alpha
Helix 15	AB6	A	603	608	Right-handed alpha
Helix 16	AB7	A	608	621	Right-handed alpha
Helix 17	AB8	A	645	651	Right-handed alpha
Helix 18	AB9	A	670	675	Right-handed 310
Helix 19	AC1	A	678	684	Right-handed 310
Helix 20	AC2	A	690	692	Right-handed 310
Helix 21	AC3	A	693	698	Right-handed alpha
Helix 22	AC4	A	701	713	Right-handed alpha
Helix 23	AC5	A	716	727	Right-handed alpha
Helix 24	AC6	A	734	741	Right-handed alpha
Helix 25	AC7	A	745	754	Right-handed alpha
Helix 26	AC8	A	759	779	Right-handed alpha
Helix 27	AC9	A	780	782	Right-handed 310
Helix 28	AD1	B	341	348	Right-handed alpha
Helix 29	AD2	B	359	372	Right-handed alpha
Helix 30	AD3	B	377	396	Right-handed alpha
Helix 31	AD4	B	403	416	Right-handed alpha
Helix 32	AD5	B	417	419	Right-handed 310
Helix 33	AD6	B	423	442	Right-handed alpha
Helix 34	AD7	B	462	476	Right-handed alpha
Helix 35	AD8	B	477	479	Right-handed 310
Helix 36	AD9	B	480	494	Right-handed alpha
Helix 37	AE1	B	497	524	Right-handed alpha
Helix 38	AE2	B	530	541	Right-handed alpha
Helix 39	AE3	B	570	582	Right-handed alpha
Helix 40	AE4	B	591	602	Right-handed alpha
Helix 41	AE5	B	603	608	Right-handed alpha
Helix 42	AE6	B	608	621	Right-handed alpha
Helix 43	AE7	B	645	651	Right-handed alpha
Helix 44	AE8	B	670	675	Right-handed 310
Helix 45	AE9	B	678	684	Right-handed 310
Helix 46	AF1	B	690	692	Right-handed 310
Helix 47	AF2	B	693	698	Right-handed alpha
Helix 48	AF3	B	701	713	Right-handed alpha
Helix 49	AF4	B	716	727	Right-handed alpha
Helix 50	AF5	B	734	741	Right-handed alpha
Helix 51	AF6	B	745	754	Right-handed alpha
Helix 52	AF7	B	759	779	Right-handed alpha
Helix 53	AF8	B	780	782	Right-handed 310
Helix 54	AF9	C	341	351	Right-handed alpha
Helix 55	AG1	C	357	372	Right-handed alpha
Helix 56	AG2	C	377	396	Right-handed alpha
Helix 57	AG3	C	403	416	Right-handed alpha
Helix 58	AG4	C	417	419	Right-handed 310
Helix 59	AG5	C	423	442	Right-handed alpha
Helix 60	AG6	C	457	461	Right-handed 310
Helix 61	AG7	C	462	476	Right-handed alpha
Helix 62	AG8	C	477	479	Right-handed 310
Helix 63	AG9	C	480	494	Right-handed alpha
Helix 64	AH1	C	497	524	Right-handed alpha
Helix 65	AH2	C	530	541	Right-handed alpha
Helix 66	AH3	C	570	582	Right-handed alpha
Helix 67	AH4	C	591	602	Right-handed alpha
Helix 68	AH5	C	603	608	Right-handed alpha
Helix 69	AH6	C	608	621	Right-handed alpha
Helix 70	AH7	C	645	651	Right-handed alpha
Helix 71	AH8	C	670	675	Right-handed 310
Helix 72	AH9	C	678	684	Right-handed 310
Helix 73	AI1	C	690	692	Right-handed 310
Helix 74	AI2	C	693	698	Right-handed alpha
Helix 75	AI3	C	701	713	Right-handed alpha
Helix 76	AI4	C	716	727	Right-handed alpha
Helix 77	AI5	C	734	741	Right-handed alpha
Helix 78	AI6	C	745	754	Right-handed alpha
Helix 79	AI7	C	759	779	Right-handed alpha
Helix 80	AI8	C	780	782	Right-handed 310
Helix 81	AI9	D	341	346	Right-handed alpha
Helix 82	AJ1	D	359	372	Right-handed alpha
Helix 83	AJ2	D	377	396	Right-handed alpha
Helix 84	AJ3	D	403	417	Right-handed alpha
Helix 85	AJ4	D	423	442	Right-handed alpha
Helix 86	AJ5	D	462	476	Right-handed alpha
Helix 87	AJ6	D	477	479	Right-handed 310
Helix 88	AJ7	D	480	494	Right-handed alpha
Helix 89	AJ8	D	497	524	Right-handed alpha
Helix 90	AJ9	D	530	541	Right-handed alpha
Helix 91	AK1	D	570	582	Right-handed alpha
Helix 92	AK2	D	591	602	Right-handed alpha
Helix 93	AK3	D	603	608	Right-handed alpha
Helix 94	AK4	D	608	621	Right-handed alpha
Helix 95	AK5	D	645	651	Right-handed alpha
Helix 96	AK6	D	670	675	Right-handed 310
Helix 97	AK7	D	678	684	Right-handed 310
Helix 98	AK8	D	690	692	Right-handed 310
Helix 99	AK9	D	693	698	Right-handed alpha
Helix 100	AL1	D	701	713	Right-handed alpha
Helix 101	AL2	D	716	727	Right-handed alpha
Helix 102	AL3	D	734	741	Right-handed alpha
Helix 103	AL4	D	745	754	Right-handed alpha
Helix 104	AL5	D	759	779	Right-handed alpha
Helix 105	AL6	D	780	782	Right-handed 310

There are 8 sheets in PDB entry 7DRI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	623	625	first strand
Strand 2	A	633	635	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	656	659	first strand
Strand 2	A	686	689	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	623	625	first strand
Strand 2	B	633	635	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	656	659	first strand
Strand 2	B	686	689	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	623	625	first strand
Strand 2	C	633	635	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	656	659	first strand
Strand 2	C	686	689	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	623	625	first strand
Strand 2	D	633	635	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	656	659	first strand
Strand 2	D	686	689	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7DRI

Analysis of interatomic Contacts of Structural Units in PDB entry:
7DRI