Analysis of interatomic Contacts of Structural Units in PDB entry:
7DRV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DRV entry

There are 3 chains in PDB entry 7DRV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 19ALA 614
C
 THR 15PRO 209
B
 SER 19LYS 465
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 7DRV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
20 53Right-handed alpha
Helix 2
AA2
A
55 81Right-handed alpha
Helix 3
AA3
A
82 83Right-handed 310
Helix 4
AA4
A
84 88Right-handed 310
Helix 5
AA5
A
90 102Right-handed alpha
Helix 6
AA6
A
103 107Right-handed 310
Helix 7
AA7
A
111 130Right-handed alpha
Helix 8
AA8
A
146 155Right-handed alpha
Helix 9
AA9
A
157 172Right-handed alpha
Helix 10
AB1
A
172 194Right-handed alpha
Helix 11
AB2
A
198 204Right-handed alpha
Helix 12
AB3
A
205 208Right-handed 310
Helix 13
AB4
A
219 232Right-handed alpha
Helix 14
AB5
A
233 252Right-handed alpha
Helix 15
AB6
A
265 267Right-handed 310
Helix 16
AB7
A
275 277Right-handed 310
Helix 17
AB8
A
278 283Right-handed alpha
Helix 18
AB9
A
293 300Right-handed alpha
Helix 19
AC1
A
303 317Right-handed alpha
Helix 20
AC2
A
324 331Right-handed alpha
Helix 21
AC3
A
365 385Right-handed alpha
Helix 22
AC4
A
386 388Right-handed 310
Helix 23
AC5
A
389 393Right-handed 310
Helix 24
AC6
A
399 414Right-handed alpha
Helix 25
AC7
A
414 419Right-handed alpha
Helix 26
AC8
A
431 446Right-handed alpha
Helix 27
AC9
A
448 466Right-handed alpha
Helix 28
AD1
A
469 471Right-handed 310
Helix 29
AD2
A
472 484Right-handed alpha
Helix 30
AD3
A
499 502Right-handed 310
Helix 31
AD4
A
503 508Right-handed alpha
Helix 32
AD5
A
513 532Right-handed alpha
Helix 33
AD6
A
538 542Right-handed 310
Helix 34
AD7
A
547 559Right-handed alpha
Helix 35
AD8
A
565 572Right-handed alpha
Helix 36
AD9
A
581 588Right-handed alpha
Helix 37
AE1
A
588 599Right-handed alpha
Helix 38
AE2
C
20 25Right-handed alpha
Helix 39
AE3
C
31 35Right-handed 310
Helix 40
AE4
C
47 52Right-handed alpha
Helix 41
AE5
C
88 92Right-handed 310
Helix 42
AE6
C
98 104Right-handed alpha
Helix 43
AE7
C
184 188Right-handed 310
Helix 44
AE8
B
20 53Right-handed alpha
Helix 45
AE9
B
59 81Right-handed alpha
Helix 46
AF1
B
90 102Right-handed alpha
Helix 47
AF2
B
103 107Right-handed 310
Helix 48
AF3
B
109 130Right-handed alpha
Helix 49
AF4
B
146 155Right-handed alpha
Helix 50
AF5
B
157 172Right-handed alpha
Helix 51
AF6
B
176 193Right-handed alpha
Helix 52
AF7
B
198 204Right-handed alpha
Helix 53
AF8
B
205 208Right-handed 310
Helix 54
AF9
B
220 231Right-handed alpha
Helix 55
AG1
B
233 252Right-handed alpha
Helix 56
AG2
B
265 267Right-handed 310
Helix 57
AG3
B
275 277Right-handed 310
Helix 58
AG4
B
278 283Right-handed alpha
Helix 59
AG5
B
293 300Right-handed alpha
Helix 60
AG6
B
303 318Right-handed alpha
Helix 61
AG7
B
324 331Right-handed alpha
Helix 62
AG8
B
365 385Right-handed alpha
Helix 63
AG9
B
386 388Right-handed 310
Helix 64
AH1
B
389 393Right-handed 310
Helix 65
AH2
B
397 405Right-handed alpha
Helix 66
AH3
B
405 413Right-handed alpha
Helix 67
AH4
B
414 421Right-handed alpha
Helix 68
AH5
B
431 446Right-handed alpha
Helix 69
AH6
B
449 465Right-handed alpha
Helix 70
AH7
B
469 471Right-handed 310
Helix 71
AH8
B
472 484Right-handed alpha
Helix 72
AH9
B
499 502Right-handed 310
Helix 73
AI1
B
503 508Right-handed alpha
Helix 74
AI2
B
513 533Right-handed alpha
Helix 75
AI3
B
538 542Right-handed 310
Helix 76
AI4
B
547 559Right-handed alpha
Helix 77
AI5
B
565 575Right-handed alpha
Helix 78
AI6
B
581 588Right-handed alpha
Helix 79
AI7
B
588 599Right-handed alpha
Helix 80
AI8
B
600 602Right-handed 310
Helix 81
AI9
D
31 35Right-handed 310
Helix 82
AJ1
D
46 50Right-handed 310
Helix 83
AJ2
D
87 92Right-handed 310
Helix 84
AJ3
D
99 104Right-handed alpha
Helix 85
AJ4
D
184 187Right-handed 310
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There are 12 sheets in PDB entry 7DRV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 132first strand
Strand 2
A
142 143anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 263first strand
Strand 2
A
487 488parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 352first strand
Strand 2
A
355 359anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
36 40first strand
Strand 2
C
76 84anti-parallel
Strand 3
C
190 198anti-parallel
Strand 4
C
113 119anti-parallel
Strand 5
C
58 61anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
134 136first strand
Strand 2
C
174 176anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
155 156first strand
Strand 2
C
170 171anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
132 133first strand
Strand 2
B
141 142anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 263first strand
Strand 2
B
487 488parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
347 352first strand
Strand 2
B
355 359anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
39 40first strand
Strand 2
D
77 85anti-parallel
Strand 3
D
189 196anti-parallel
Strand 4
D
113 119anti-parallel
Strand 5
D
58 61anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
134 136first strand
Strand 2
D
174 176anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
155 156first strand
Strand 2
D
170 171anti-parallel
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