Analysis of interatomic Contacts of Structural Units in PDB entry:
7DSN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DSN entry

There are 2 chains in PDB entry 7DSN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 161ALA 631
B
 VAL 44THR 507
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 7DSN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
166 174Right-handed alpha
Helix 2
AA2
A
178 207Right-handed alpha
Helix 3
AA3
A
231 236Right-handed alpha
Helix 4
AA4
A
241 246Right-handed alpha
Helix 5
AA5
A
247 249Right-handed 310
Helix 6
AA6
A
250 255Right-handed alpha
Helix 7
AA7
A
287 300Right-handed alpha
Helix 8
AA8
A
325 342Right-handed alpha
Helix 9
AA9
A
356 370Right-handed alpha
Helix 10
AB1
A
385 393Right-handed alpha
Helix 11
AB2
A
412 427Right-handed alpha
Helix 12
AB3
A
441 445Right-handed 310
Helix 13
AB4
A
450 459Right-handed alpha
Helix 14
AB5
A
509 514Right-handed alpha
Helix 15
AB6
A
520 532Right-handed alpha
Helix 16
AB7
A
534 539Right-handed alpha
Helix 17
AB8
B
51 64Right-handed alpha
Helix 18
AB9
B
73 78Right-handed alpha
Helix 19
AC1
B
81 110Right-handed alpha
Helix 20
AC2
B
117 125Right-handed alpha
Helix 21
AC3
B
126 139Right-handed alpha
Helix 22
AC4
B
139 158Right-handed alpha
Helix 23
AC5
B
159 161Right-handed 310
Helix 24
AC6
B
167 189Right-handed alpha
Helix 25
AC7
B
189 220Right-handed alpha
Helix 26
AC8
B
242 248Right-handed alpha
Helix 27
AC9
B
259 263Right-handed 310
Helix 28
AD1
B
269 274Right-handed alpha
Helix 29
AD2
B
274 300Right-handed alpha
Helix 30
AD3
B
301 306Right-handed alpha
Helix 31
AD4
B
310 320Right-handed alpha
Helix 32
AD5
B
325 333Right-handed alpha
Helix 33
AD6
B
336 356Right-handed alpha
Helix 34
AD7
B
373 386Right-handed alpha
Helix 35
AD8
B
387 390Right-handed 310
Helix 36
AD9
B
393 397Right-handed 310
Helix 37
AE1
B
400 420Right-handed alpha
Helix 38
AE2
B
434 448Right-handed alpha
Helix 39
AE3
B
448 453Right-handed alpha
Helix 40
AE4
B
457 476Right-handed alpha
Helix 41
AE5
B
482 501Right-handed alpha
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There are 6 sheets in PDB entry 7DSN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
400 402first strand
Strand 2
A
376 380parallel
Strand 3
A
345 348parallel
Strand 4
A
304 308parallel
Strand 5
A
259 262parallel
Strand 6
A
225 228parallel
Strand 7
A
463 468parallel
Strand 8
A
432 434parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 268first strand
Strand 2
A
276 281anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
541 545first strand
Strand 2
A
551 557anti-parallel
Strand 3
A
563 569anti-parallel
Strand 4
A
622 627anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
575 576first strand
Strand 2
A
616 617anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
593 594first strand
Strand 2
A
610 611anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
365 366first strand
Strand 2
B
503 504anti-parallel
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