Analysis of interatomic Contacts of Structural Units in PDB entry:
7DSZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DSZ entry

There are 3 chains in PDB entry 7DSZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 22PRO 213
B
 HIS 22ASN 214
C
 MET 23ASN 214
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 7DSZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
130 139Right-handed alpha
Helix 2
AA2
A
169 173Right-handed 310
Helix 3
AA3
A
174 178Right-handed 310
Helix 4
AA4
A
193 197Right-handed 310
Helix 5
AA5
A
203 207Right-handed 310
Helix 6
AA6
B
130 139Right-handed alpha
Helix 7
AA7
B
169 173Right-handed 310
Helix 8
AA8
B
174 178Right-handed 310
Helix 9
AA9
B
193 202Right-handed 310
Helix 10
AB1
C
130 139Right-handed alpha
Helix 11
AB2
C
169 173Right-handed 310
Helix 12
AB3
C
174 178Right-handed 310
Helix 13
AB4
C
193 197Right-handed 310
Helix 14
AB5
C
203 207Right-handed 310
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There are 12 sheets in PDB entry 7DSZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 37first strand
Strand 2
A
64 77anti-parallel
Strand 3
A
41 46anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 37first strand
Strand 2
A
64 77anti-parallel
Strand 3
A
123 129anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 166first strand
Strand 2
A
148 157anti-parallel
Strand 3
A
84 97anti-parallel
Strand 4
A
105 118anti-parallel
Strand 5
A
183 185parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
160 166first strand
Strand 2
A
148 157anti-parallel
Strand 3
A
84 97anti-parallel
Strand 4
A
105 118anti-parallel
Strand 5
A
209 210anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 37first strand
Strand 2
B
64 77anti-parallel
Strand 3
B
41 46anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 37first strand
Strand 2
B
64 77anti-parallel
Strand 3
B
123 129anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 166first strand
Strand 2
B
148 157anti-parallel
Strand 3
B
84 97anti-parallel
Strand 4
B
105 118anti-parallel
Strand 5
B
183 185parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
160 166first strand
Strand 2
B
148 157anti-parallel
Strand 3
B
84 97anti-parallel
Strand 4
B
105 118anti-parallel
Strand 5
B
209 210anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 37first strand
Strand 2
C
64 77anti-parallel
Strand 3
C
41 46anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
32 37first strand
Strand 2
C
64 77anti-parallel
Strand 3
C
123 129anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 166first strand
Strand 2
C
148 157anti-parallel
Strand 3
C
84 97anti-parallel
Strand 4
C
105 118anti-parallel
Strand 5
C
183 185parallel
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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
160 166first strand
Strand 2
C
148 157anti-parallel
Strand 3
C
84 97anti-parallel
Strand 4
C
105 118anti-parallel
Strand 5
C
209 210anti-parallel
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