Analysis of interatomic Contacts of Structural Units in PDB entry:
7DT0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7DT0 entry

There are 8 chains in PDB entry 7DT0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 6	PHE 266
B	THR 6	PHE 266
C	THR 6	PHE 266
D	THR 6	PHE 266
E	THR 6	PHE 266
F	THR 6	PHE 266
G	THR 6	ALA 263
H	THR 6	PHE 266

There are 64 helices in PDB entry 7DT0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	19	Right-handed alpha
Helix 2	AA2	A	28	46	Right-handed alpha
Helix 3	AA3	A	65	68	Right-handed 310
Helix 4	AA4	A	69	76	Right-handed alpha
Helix 5	AA5	A	81	90	Right-handed alpha
Helix 6	AA6	A	115	125	Right-handed alpha
Helix 7	AA7	A	169	174	Right-handed alpha
Helix 8	AA8	A	182	194	Right-handed alpha
Helix 9	AA9	A	240	244	Right-handed 310
Helix 10	AB1	B	8	19	Right-handed alpha
Helix 11	AB2	B	28	46	Right-handed alpha
Helix 12	AB3	B	65	68	Right-handed 310
Helix 13	AB4	B	69	76	Right-handed alpha
Helix 14	AB5	B	81	90	Right-handed alpha
Helix 15	AB6	B	115	125	Right-handed alpha
Helix 16	AB7	B	182	194	Right-handed alpha
Helix 17	AB8	B	240	244	Right-handed 310
Helix 18	AB9	C	8	19	Right-handed alpha
Helix 19	AC1	C	28	46	Right-handed alpha
Helix 20	AC2	C	65	68	Right-handed 310
Helix 21	AC3	C	69	77	Right-handed alpha
Helix 22	AC4	C	81	90	Right-handed alpha
Helix 23	AC5	C	115	123	Right-handed alpha
Helix 24	AC6	C	182	194	Right-handed alpha
Helix 25	AC7	C	260	264	Right-handed 310
Helix 26	AC8	D	8	19	Right-handed alpha
Helix 27	AC9	D	28	46	Right-handed alpha
Helix 28	AD1	D	65	68	Right-handed 310
Helix 29	AD2	D	69	76	Right-handed alpha
Helix 30	AD3	D	81	90	Right-handed alpha
Helix 31	AD4	D	115	124	Right-handed alpha
Helix 32	AD5	D	182	194	Right-handed alpha
Helix 33	AD6	E	8	19	Right-handed alpha
Helix 34	AD7	E	28	46	Right-handed alpha
Helix 35	AD8	E	65	68	Right-handed 310
Helix 36	AD9	E	69	76	Right-handed alpha
Helix 37	AE1	E	81	90	Right-handed alpha
Helix 38	AE2	E	115	125	Right-handed alpha
Helix 39	AE3	E	182	194	Right-handed alpha
Helix 40	AE4	E	260	264	Right-handed 310
Helix 41	AE5	F	8	19	Right-handed alpha
Helix 42	AE6	F	28	46	Right-handed alpha
Helix 43	AE7	F	64	69	Right-handed alpha
Helix 44	AE8	F	69	76	Right-handed alpha
Helix 45	AE9	F	81	90	Right-handed alpha
Helix 46	AF1	F	115	125	Right-handed alpha
Helix 47	AF2	F	156	160	Right-handed 310
Helix 48	AF3	F	182	194	Right-handed alpha
Helix 49	AF4	F	236	238	Right-handed 310
Helix 50	AF5	F	247	251	Right-handed 310
Helix 51	AF6	G	8	19	Right-handed alpha
Helix 52	AF7	G	28	46	Right-handed alpha
Helix 53	AF8	G	65	68	Right-handed 310
Helix 54	AF9	G	69	76	Right-handed alpha
Helix 55	AG1	G	81	90	Right-handed alpha
Helix 56	AG2	G	115	125	Right-handed alpha
Helix 57	AG3	G	182	194	Right-handed alpha
Helix 58	AG4	H	8	19	Right-handed alpha
Helix 59	AG5	H	28	46	Right-handed alpha
Helix 60	AG6	H	65	68	Right-handed 310
Helix 61	AG7	H	69	76	Right-handed alpha
Helix 62	AG8	H	81	89	Right-handed alpha
Helix 63	AG9	H	115	124	Right-handed alpha
Helix 64	AH1	H	182	194	Right-handed alpha

There are 16 sheets in PDB entry 7DT0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	23	first strand
Strand 2	A	205	209	anti-parallel
Strand 3	A	131	137	anti-parallel
Strand 4	A	225	234	anti-parallel
Strand 5	A	93	103	anti-parallel
Strand 6	A	59	63	anti-parallel
Strand 7	A	50	52	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	148	150	first strand
Strand 2	A	214	216	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	20	23	first strand
Strand 2	B	205	209	anti-parallel
Strand 3	B	131	137	anti-parallel
Strand 4	B	225	234	anti-parallel
Strand 5	B	93	103	anti-parallel
Strand 6	B	59	63	anti-parallel
Strand 7	B	50	52	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	150	first strand
Strand 2	B	214	216	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	20	23	first strand
Strand 2	C	205	209	anti-parallel
Strand 3	C	131	137	anti-parallel
Strand 4	C	225	234	anti-parallel
Strand 5	C	93	103	anti-parallel
Strand 6	C	59	63	anti-parallel
Strand 7	C	50	52	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	148	150	first strand
Strand 2	C	214	216	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	20	23	first strand
Strand 2	D	205	209	anti-parallel
Strand 3	D	131	137	anti-parallel
Strand 4	D	225	234	anti-parallel
Strand 5	D	93	103	anti-parallel
Strand 6	D	61	63	anti-parallel
Strand 7	D	50	51	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	148	150	first strand
Strand 2	D	214	216	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	20	23	first strand
Strand 2	E	205	209	anti-parallel
Strand 3	E	131	137	anti-parallel
Strand 4	E	225	234	anti-parallel
Strand 5	E	93	103	anti-parallel
Strand 6	E	61	63	anti-parallel
Strand 7	E	50	51	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	148	150	first strand
Strand 2	E	214	216	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	20	23	first strand
Strand 2	F	205	209	anti-parallel
Strand 3	F	131	137	anti-parallel
Strand 4	F	225	234	anti-parallel
Strand 5	F	93	103	anti-parallel
Strand 6	F	59	63	anti-parallel
Strand 7	F	50	52	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	148	150	first strand
Strand 2	F	214	216	anti-parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	20	23	first strand
Strand 2	G	205	209	anti-parallel
Strand 3	G	131	137	anti-parallel
Strand 4	G	225	234	anti-parallel
Strand 5	G	93	103	anti-parallel
Strand 6	G	59	63	anti-parallel
Strand 7	G	50	52	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	148	150	first strand
Strand 2	G	214	216	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	20	23	first strand
Strand 2	H	205	209	anti-parallel
Strand 3	H	131	137	anti-parallel
Strand 4	H	225	234	anti-parallel
Strand 5	H	93	103	anti-parallel
Strand 6	H	59	63	anti-parallel
Strand 7	H	50	52	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	148	150	first strand
Strand 2	H	214	216	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7DT0

Analysis of interatomic Contacts of Structural Units in PDB entry:
7DT0