Analysis of interatomic Contacts of Structural Units in PDB entry:
7DTG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7DTG entry

There are 6 chains in PDB entry 7DTG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 431	THR 548
B	SER 431	THR 548
C	SER 431	THR 548
D	SER 431	THR 548
F	SER 431	THR 548
E	SER 431	THR 548

There are 4 helices in PDB entry 7DTG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	501	504	Right-handed 310
Helix 2	AA2	B	502	504	Right-handed 310
Helix 3	AA3	C	502	504	Right-handed 310
Helix 4	AA4	F	501	504	Right-handed 310

There are 15 sheets in PDB entry 7DTG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	478	483	first strand
Strand 2	A	470	475	anti-parallel
Strand 3	A	527	532	anti-parallel
Strand 4	A	538	546	anti-parallel
Strand 5	A	432	438	anti-parallel
Strand 6	E	434	438	anti-parallel
Strand 7	E	540	543	anti-parallel
Strand 8	E	527	532	anti-parallel
Strand 9	E	470	475	anti-parallel
Strand 10	E	478	483	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	442	447	first strand
Strand 2	A	453	458	anti-parallel
Strand 3	A	495	499	anti-parallel
Strand 4	A	512	514	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	464	465	first strand
Strand 2	A	489	490	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	478	483	first strand
Strand 2	B	470	475	anti-parallel
Strand 3	B	527	532	anti-parallel
Strand 4	B	538	544	anti-parallel
Strand 5	B	434	438	anti-parallel
Strand 6	F	432	438	anti-parallel
Strand 7	F	538	546	anti-parallel
Strand 8	F	527	532	anti-parallel
Strand 9	F	470	475	anti-parallel
Strand 10	F	478	483	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	442	447	first strand
Strand 2	B	453	458	anti-parallel
Strand 3	B	495	500	anti-parallel
Strand 4	B	512	515	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	464	465	first strand
Strand 2	B	489	490	anti-parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	478	483	first strand
Strand 2	C	470	475	anti-parallel
Strand 3	C	527	532	anti-parallel
Strand 4	C	538	546	anti-parallel
Strand 5	C	432	438	anti-parallel
Strand 6	D	432	438	anti-parallel
Strand 7	D	538	546	anti-parallel
Strand 8	D	528	532	anti-parallel
Strand 9	D	470	475	anti-parallel
Strand 10	D	478	483	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	442	447	first strand
Strand 2	C	453	458	anti-parallel
Strand 3	C	495	500	anti-parallel
Strand 4	C	512	515	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	464	465	first strand
Strand 2	C	489	490	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	442	447	first strand
Strand 2	D	453	458	anti-parallel
Strand 3	D	495	500	anti-parallel
Strand 4	D	512	515	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	464	465	first strand
Strand 2	D	489	490	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	442	447	first strand
Strand 2	F	453	458	anti-parallel
Strand 3	F	495	499	anti-parallel
Strand 4	F	512	514	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	464	465	first strand
Strand 2	F	489	490	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	442	447	first strand
Strand 2	E	453	458	anti-parallel
Strand 3	E	495	499	anti-parallel
Strand 4	E	512	514	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	464	465	first strand
Strand 2	E	489	490	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7DTG

Analysis of interatomic Contacts of Structural Units in PDB entry:
7DTG