Analysis of interatomic Contacts of Structural Units in PDB entry:
7DTJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DTJ entry

There is 1 chain in PDB entry 7DTJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 247GLN 419
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 7DTJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
263 265Right-handed 310
Helix 2
AA2
A
266 278Right-handed alpha
Helix 3
AA3
A
289 304Right-handed alpha
Helix 4
AA4
A
315 329Right-handed alpha
Helix 5
AA5
A
360 369Right-handed alpha
Helix 6
AA6
A
385 387Right-handed 310
Helix 7
AA7
A
388 399Right-handed alpha
Helix 8
AA8
A
411 415Right-handed 310
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There is 1 sheet (AA1) in PDB entry 7DTJ.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 310first strand
Strand 2
A
333 336parallel
Strand 3
A
282 286parallel
Strand 4
A
349 354parallel
Strand 5
A
378 384parallel
Strand 6
A
255 261parallel
Strand 7
A
403 405parallel
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