Analysis of interatomic Contacts of Structural Units in PDB entry:
7DTK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DTK entry

There are 2 chains in PDB entry 7DTK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 42ASN 245
A
 VAL 43ASN 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7DTK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
44 49Right-handed 310
Helix 2
AA2
B
51 61Right-handed alpha
Helix 3
AA3
B
67 79Right-handed alpha
Helix 4
AA4
B
91 104Right-handed alpha
Helix 5
AA5
B
120 135Right-handed alpha
Helix 6
AA6
B
150 160Right-handed alpha
Helix 7
AA7
B
168 178Right-handed alpha
Helix 8
AA8
B
193 198Right-handed alpha
Helix 9
AA9
B
199 203Right-handed 310
Helix 10
AB1
B
204 211Right-handed alpha
Helix 11
AB2
B
227 238Right-handed alpha
Helix 12
AB3
A
44 48Right-handed 310
Helix 13
AB4
A
51 61Right-handed alpha
Helix 14
AB5
A
67 79Right-handed alpha
Helix 15
AB6
A
90 105Right-handed alpha
Helix 16
AB7
A
120 135Right-handed alpha
Helix 17
AB8
A
150 160Right-handed alpha
Helix 18
AB9
A
168 178Right-handed alpha
Helix 19
AC1
A
193 200Right-handed alpha
Helix 20
AC2
A
204 211Right-handed alpha
Helix 21
AC3
A
227 238Right-handed alpha
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There are 2 sheets in PDB entry 7DTK. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 145first strand
Strand 2
B
164 167parallel
Strand 3
B
114 117parallel
Strand 4
B
188 192parallel
Strand 5
B
218 223parallel
Strand 6
B
83 86parallel
Strand 7
B
242 244parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 145first strand
Strand 2
A
164 167parallel
Strand 3
A
114 117parallel
Strand 4
A
188 192parallel
Strand 5
A
218 223parallel
Strand 6
A
83 86parallel
Strand 7
A
242 244parallel
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