Analysis of interatomic Contacts of Structural Units in PDB entry:
7DTW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DTW entry

There are 2 chains in PDB entry 7DTW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 21ILE 859
B
 GLY 21ILE 859
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 7DTW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
64 84Right-handed alpha
Helix 2
AA2
A
103 115Right-handed alpha
Helix 3
AA3
A
117 122Right-handed 310
Helix 4
AA4
A
126 131Right-handed alpha
Helix 5
AA5
A
146 161Right-handed alpha
Helix 6
AA6
A
171 176Right-handed 310
Helix 7
AA7
A
189 205Right-handed alpha
Helix 8
AA8
A
219 234Right-handed alpha
Helix 9
AA9
A
248 261Right-handed alpha
Helix 10
AB1
A
272 287Right-handed alpha
Helix 11
AB2
A
307 312Right-handed alpha
Helix 12
AB3
A
329 336Right-handed alpha
Helix 13
AB4
A
347 356Right-handed alpha
Helix 14
AB5
A
400 404Right-handed 310
Helix 15
AB6
A
415 436Right-handed alpha
Helix 16
AB7
A
444 448Right-handed 310
Helix 17
AB8
A
456 465Right-handed alpha
Helix 18
AB9
A
529 533Right-handed 310
Helix 19
AC1
A
610 637Right-handed alpha
Helix 20
AC2
A
652 668Right-handed alpha
Helix 21
AC3
A
673 679Right-handed alpha
Helix 22
AC4
A
681 697Right-handed alpha
Helix 23
AC5
A
728 746Right-handed alpha
Helix 24
AC6
A
770 796Right-handed alpha
Helix 25
AC7
A
802 821Right-handed alpha
Helix 26
AC8
A
829 831Right-handed 310
Helix 27
AC9
A
832 858Right-handed alpha
Helix 28
AD1
B
64 84Right-handed alpha
Helix 29
AD2
B
103 115Right-handed alpha
Helix 30
AD3
B
117 122Right-handed 310
Helix 31
AD4
B
126 131Right-handed alpha
Helix 32
AD5
B
146 161Right-handed alpha
Helix 33
AD6
B
171 176Right-handed 310
Helix 34
AD7
B
189 205Right-handed alpha
Helix 35
AD8
B
219 234Right-handed alpha
Helix 36
AD9
B
248 261Right-handed alpha
Helix 37
AE1
B
272 287Right-handed alpha
Helix 38
AE2
B
307 312Right-handed alpha
Helix 39
AE3
B
329 336Right-handed alpha
Helix 40
AE4
B
347 356Right-handed alpha
Helix 41
AE5
B
400 404Right-handed 310
Helix 42
AE6
B
415 436Right-handed alpha
Helix 43
AE7
B
444 448Right-handed 310
Helix 44
AE8
B
456 465Right-handed alpha
Helix 45
AE9
B
529 533Right-handed 310
Helix 46
AF1
B
610 637Right-handed alpha
Helix 47
AF2
B
652 668Right-handed alpha
Helix 48
AF3
B
673 679Right-handed alpha
Helix 49
AF4
B
681 697Right-handed alpha
Helix 50
AF5
B
728 746Right-handed alpha
Helix 51
AF6
B
770 796Right-handed alpha
Helix 52
AF7
B
802 821Right-handed alpha
Helix 53
AF8
B
829 831Right-handed 310
Helix 54
AF9
B
832 858Right-handed alpha
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There are 12 sheets in PDB entry 7DTW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 28first strand
Strand 2
A
95 97anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 142first strand
Strand 2
A
164 166parallel
Strand 3
A
183 185parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 241first strand
Strand 2
A
208 213parallel
Strand 3
A
266 270parallel
Strand 4
A
292 295parallel
Strand 5
A
318 319parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
468 470first strand
Strand 2
A
476 478anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
489 496first strand
Strand 2
A
503 511anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
550 551first strand
Strand 2
A
566 567anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
26 28first strand
Strand 2
B
95 97anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 142first strand
Strand 2
B
164 166parallel
Strand 3
B
183 185parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
236 241first strand
Strand 2
B
208 213parallel
Strand 3
B
266 270parallel
Strand 4
B
292 295parallel
Strand 5
B
318 319parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
468 470first strand
Strand 2
B
476 478anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
489 496first strand
Strand 2
B
503 511anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
550 551first strand
Strand 2
B
566 567anti-parallel
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