Analysis of interatomic Contacts of Structural Units in PDB entry:
7DV3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DV3 entry

There are 2 chains in PDB entry 7DV3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 220
B
 MET 1GLU 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7DV3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 26Right-handed alpha
Helix 2
AA2
A
40 46Right-handed alpha
Helix 3
AA3
A
74 83Right-handed alpha
Helix 4
AA4
A
84 97Right-handed alpha
Helix 5
AA5
A
111 121Right-handed alpha
Helix 6
AA6
A
131 148Right-handed alpha
Helix 7
AA7
A
181 191Right-handed alpha
Helix 8
AA8
A
193 202Right-handed alpha
Helix 9
AA9
A
206 219Right-handed alpha
Helix 10
AB1
B
13 27Right-handed alpha
Helix 11
AB2
B
40 46Right-handed alpha
Helix 12
AB3
B
74 83Right-handed alpha
Helix 13
AB4
B
84 97Right-handed alpha
Helix 14
AB5
B
111 120Right-handed alpha
Helix 15
AB6
B
131 147Right-handed alpha
Helix 16
AB7
B
181 191Right-handed alpha
Helix 17
AB8
B
193 202Right-handed alpha
Helix 18
AB9
B
207 219Right-handed alpha
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There are 2 sheets in PDB entry 7DV3. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 64first strand
Strand 2
A
67 70anti-parallel
Strand 3
A
31 35parallel
Strand 4
A
101 105parallel
Strand 5
A
2 5parallel
Strand 6
A
123 128parallel
Strand 7
A
152 157parallel
Strand 8
A
171 178parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 64first strand
Strand 2
B
67 70anti-parallel
Strand 3
B
31 35parallel
Strand 4
B
101 105parallel
Strand 5
B
2 5parallel
Strand 6
B
123 128parallel
Strand 7
B
152 157parallel
Strand 8
B
171 178parallel
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