Analysis of interatomic Contacts of Structural Units in PDB entry:
7DW1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DW1 entry

There are 2 chains in PDB entry 7DW1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 5LYS 222
B
 ASP 5LYS 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 7DW1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 28Right-handed alpha
Helix 2
AA2
A
42 47Right-handed alpha
Helix 3
AA3
A
67 79Right-handed alpha
Helix 4
AA4
A
89 106Right-handed alpha
Helix 5
AA5
A
106 113Right-handed alpha
Helix 6
AA6
A
119 145Right-handed alpha
Helix 7
AA7
A
157 165Right-handed alpha
Helix 8
AA8
A
166 176Right-handed alpha
Helix 9
AA9
A
187 198Right-handed alpha
Helix 10
AB1
A
200 205Right-handed alpha
Helix 11
AB2
A
209 221Right-handed alpha
Helix 12
AB3
B
17 27Right-handed alpha
Helix 13
AB4
B
42 49Right-handed alpha
Helix 14
AB5
B
67 79Right-handed alpha
Helix 15
AB6
B
89 106Right-handed alpha
Helix 16
AB7
B
106 113Right-handed alpha
Helix 17
AB8
B
114 116Right-handed 310
Helix 18
AB9
B
119 146Right-handed alpha
Helix 19
AC1
B
157 165Right-handed alpha
Helix 20
AC2
B
166 176Right-handed alpha
Helix 21
AC3
B
187 198Right-handed alpha
Helix 22
AC4
B
203 207Right-handed 310
Helix 23
AC5
B
209 220Right-handed alpha
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There are 2 sheets in PDB entry 7DW1. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 33first strand
Strand 2
A
6 9parallel
Strand 3
A
57 60anti-parallel
Strand 4
A
64 66anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 35first strand
Strand 2
B
6 10parallel
Strand 3
B
57 60anti-parallel
Strand 4
B
63 66anti-parallel
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