Analysis of interatomic Contacts of Structural Units in PDB entry:
7DWB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7DWB entry

There are 7 chains in PDB entry 7DWB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 2	CYS 434
B	ALA 2	CYS 434
C	ALA 2	CYS 434
D	ALA 2	CYS 434
E	ALA 2	CYS 434
F	ALA 2	CYS 434
G	ALA 2	CYS 434

There are126 helices in PDB entry 7DWB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	13	Right-handed alpha
Helix 2	AA2	A	32	54	Right-handed alpha
Helix 3	AA3	A	59	62	Right-handed 310
Helix 4	AA4	A	73	87	Right-handed alpha
Helix 5	AA5	A	102	106	Right-handed 310
Helix 6	AA6	A	108	120	Right-handed alpha
Helix 7	AA7	A	121	160	Right-handed alpha
Helix 8	AA8	A	161	164	Right-handed 310
Helix 9	AA9	A	202	211	Right-handed alpha
Helix 10	AB1	A	218	247	Right-handed alpha
Helix 11	AB2	A	259	264	Right-handed 310
Helix 12	AB3	A	277	302	Right-handed alpha
Helix 13	AB4	A	313	318	Right-handed 310
Helix 14	AB5	A	338	347	Right-handed alpha
Helix 15	AB6	A	350	357	Right-handed alpha
Helix 16	AB7	A	358	363	Right-handed 310
Helix 17	AB8	A	375	381	Right-handed 310
Helix 18	AB9	A	403	407	Right-handed 310
Helix 19	AC1	B	6	13	Right-handed alpha
Helix 20	AC2	B	32	54	Right-handed alpha
Helix 21	AC3	B	59	62	Right-handed 310
Helix 22	AC4	B	73	87	Right-handed alpha
Helix 23	AC5	B	102	106	Right-handed 310
Helix 24	AC6	B	108	120	Right-handed alpha
Helix 25	AC7	B	121	160	Right-handed alpha
Helix 26	AC8	B	161	164	Right-handed 310
Helix 27	AC9	B	202	211	Right-handed alpha
Helix 28	AD1	B	218	247	Right-handed alpha
Helix 29	AD2	B	259	264	Right-handed 310
Helix 30	AD3	B	277	302	Right-handed alpha
Helix 31	AD4	B	313	318	Right-handed 310
Helix 32	AD5	B	338	347	Right-handed alpha
Helix 33	AD6	B	350	357	Right-handed alpha
Helix 34	AD7	B	358	363	Right-handed 310
Helix 35	AD8	B	375	381	Right-handed 310
Helix 36	AD9	B	403	407	Right-handed 310
Helix 37	AE1	C	6	13	Right-handed alpha
Helix 38	AE2	C	32	54	Right-handed alpha
Helix 39	AE3	C	59	62	Right-handed 310
Helix 40	AE4	C	73	87	Right-handed alpha
Helix 41	AE5	C	102	106	Right-handed 310
Helix 42	AE6	C	108	120	Right-handed alpha
Helix 43	AE7	C	121	160	Right-handed alpha
Helix 44	AE8	C	161	164	Right-handed 310
Helix 45	AE9	C	202	211	Right-handed alpha
Helix 46	AF1	C	218	247	Right-handed alpha
Helix 47	AF2	C	259	264	Right-handed 310
Helix 48	AF3	C	277	302	Right-handed alpha
Helix 49	AF4	C	313	318	Right-handed 310
Helix 50	AF5	C	338	347	Right-handed alpha
Helix 51	AF6	C	350	357	Right-handed alpha
Helix 52	AF7	C	358	363	Right-handed 310
Helix 53	AF8	C	375	381	Right-handed 310
Helix 54	AF9	C	403	407	Right-handed 310
Helix 55	AG1	D	6	13	Right-handed alpha
Helix 56	AG2	D	32	54	Right-handed alpha
Helix 57	AG3	D	59	62	Right-handed 310
Helix 58	AG4	D	73	87	Right-handed alpha
Helix 59	AG5	D	102	106	Right-handed 310
Helix 60	AG6	D	108	120	Right-handed alpha
Helix 61	AG7	D	121	160	Right-handed alpha
Helix 62	AG8	D	161	164	Right-handed 310
Helix 63	AG9	D	202	211	Right-handed alpha
Helix 64	AH1	D	218	247	Right-handed alpha
Helix 65	AH2	D	259	264	Right-handed 310
Helix 66	AH3	D	277	302	Right-handed alpha
Helix 67	AH4	D	313	318	Right-handed 310
Helix 68	AH5	D	338	347	Right-handed alpha
Helix 69	AH6	D	350	357	Right-handed alpha
Helix 70	AH7	D	358	363	Right-handed 310
Helix 71	AH8	D	375	381	Right-handed 310
Helix 72	AH9	D	403	407	Right-handed 310
Helix 73	AI1	E	6	13	Right-handed alpha
Helix 74	AI2	E	32	54	Right-handed alpha
Helix 75	AI3	E	59	62	Right-handed 310
Helix 76	AI4	E	73	87	Right-handed alpha
Helix 77	AI5	E	102	106	Right-handed 310
Helix 78	AI6	E	108	120	Right-handed alpha
Helix 79	AI7	E	121	160	Right-handed alpha
Helix 80	AI8	E	161	164	Right-handed 310
Helix 81	AI9	E	202	211	Right-handed alpha
Helix 82	AJ1	E	218	247	Right-handed alpha
Helix 83	AJ2	E	259	264	Right-handed 310
Helix 84	AJ3	E	277	302	Right-handed alpha
Helix 85	AJ4	E	313	318	Right-handed 310
Helix 86	AJ5	E	338	347	Right-handed alpha
Helix 87	AJ6	E	350	357	Right-handed alpha
Helix 88	AJ7	E	358	363	Right-handed 310
Helix 89	AJ8	E	375	381	Right-handed 310
Helix 90	AJ9	E	403	407	Right-handed 310
Helix 91	AK1	F	6	13	Right-handed alpha
Helix 92	AK2	F	32	54	Right-handed alpha
Helix 93	AK3	F	59	62	Right-handed 310
Helix 94	AK4	F	73	87	Right-handed alpha
Helix 95	AK5	F	102	106	Right-handed 310
Helix 96	AK6	F	108	120	Right-handed alpha
Helix 97	AK7	F	121	160	Right-handed alpha
Helix 98	AK8	F	161	164	Right-handed 310
Helix 99	AK9	F	202	211	Right-handed alpha
Helix 100	AL1	F	218	247	Right-handed alpha
Helix 101	AL2	F	259	264	Right-handed 310
Helix 102	AL3	F	277	302	Right-handed alpha
Helix 103	AL4	F	313	318	Right-handed 310
Helix 104	AL5	F	338	347	Right-handed alpha
Helix 105	AL6	F	350	357	Right-handed alpha
Helix 106	AL7	F	358	363	Right-handed 310
Helix 107	AL8	F	375	381	Right-handed 310
Helix 108	AL9	F	403	407	Right-handed 310
Helix 109	AM1	G	6	13	Right-handed alpha
Helix 110	AM2	G	32	54	Right-handed alpha
Helix 111	AM3	G	59	62	Right-handed 310
Helix 112	AM4	G	73	87	Right-handed alpha
Helix 113	AM5	G	102	106	Right-handed 310
Helix 114	AM6	G	108	120	Right-handed alpha
Helix 115	AM7	G	121	160	Right-handed alpha
Helix 116	AM8	G	161	164	Right-handed 310
Helix 117	AM9	G	202	211	Right-handed alpha
Helix 118	AN1	G	218	247	Right-handed alpha
Helix 119	AN2	G	259	264	Right-handed 310
Helix 120	AN3	G	277	302	Right-handed alpha
Helix 121	AN4	G	313	318	Right-handed 310
Helix 122	AN5	G	338	347	Right-handed alpha
Helix 123	AN6	G	350	357	Right-handed alpha
Helix 124	AN7	G	358	363	Right-handed 310
Helix 125	AN8	G	375	381	Right-handed 310
Helix 126	AN9	G	403	407	Right-handed 310

There are 7 sheets in PDB entry 7DWB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	67	first strand
Strand 2	A	271	275	anti-parallel
Strand 3	A	251	254	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	67	first strand
Strand 2	B	271	275	anti-parallel
Strand 3	B	251	254	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	67	first strand
Strand 2	C	271	275	anti-parallel
Strand 3	C	251	254	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	67	first strand
Strand 2	D	271	275	anti-parallel
Strand 3	D	251	254	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	64	67	first strand
Strand 2	E	271	275	anti-parallel
Strand 3	E	251	254	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	64	67	first strand
Strand 2	F	271	275	anti-parallel
Strand 3	F	251	254	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	64	67	first strand
Strand 2	G	271	275	anti-parallel
Strand 3	G	251	254	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7DWB

Analysis of interatomic Contacts of Structural Units in PDB entry:
7DWB