Analysis of interatomic Contacts of Structural Units in PDB entry:
7DWO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DWO entry

There are 2 chains in PDB entry 7DWO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASP 292
B
 MET 1ASP 292
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 7DWO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 18Right-handed alpha
Helix 2
AA2
A
19 27Right-handed alpha
Helix 3
AA3
A
30 46Right-handed alpha
Helix 4
AA4
A
60 91Right-handed alpha
Helix 5
AA5
A
100 114Right-handed alpha
Helix 6
AA6
A
133 141Right-handed alpha
Helix 7
AA7
A
151 156Right-handed alpha
Helix 8
AA8
A
202 207Right-handed alpha
Helix 9
AA9
A
208 213Right-handed 310
Helix 10
AB1
A
223 233Right-handed alpha
Helix 11
AB2
A
245 251Right-handed alpha
Helix 12
AB3
A
259 263Right-handed 310
Helix 13
AB4
A
278 290Right-handed alpha
Helix 14
AB5
B
4 18Right-handed alpha
Helix 15
AB6
B
19 27Right-handed alpha
Helix 16
AB7
B
30 46Right-handed alpha
Helix 17
AB8
B
60 91Right-handed alpha
Helix 18
AB9
B
100 114Right-handed alpha
Helix 19
AC1
B
133 140Right-handed alpha
Helix 20
AC2
B
200 207Right-handed alpha
Helix 21
AC3
B
223 233Right-handed alpha
Helix 22
AC4
B
245 251Right-handed alpha
Helix 23
AC5
B
259 263Right-handed 310
Helix 24
AC6
B
278 290Right-handed alpha
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There are 6 sheets in PDB entry 7DWO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 51first strand
Strand 2
A
58 59anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 241first strand
Strand 2
A
160 174anti-parallel
Strand 3
A
254 256anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 241first strand
Strand 2
A
160 174anti-parallel
Strand 3
A
264 272anti-parallel
Strand 4
A
145 149anti-parallel
Strand 5
A
94 99parallel
Strand 6
A
123 128parallel
Strand 7
B
215 221parallel
Strand 8
B
191 195parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 195first strand
Strand 2
A
215 221parallel
Strand 3
B
123 128parallel
Strand 4
B
94 99parallel
Strand 5
B
145 149parallel
Strand 6
B
264 272anti-parallel
Strand 7
B
160 174anti-parallel
Strand 8
B
238 241anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 195first strand
Strand 2
A
215 221parallel
Strand 3
B
123 128parallel
Strand 4
B
94 99parallel
Strand 5
B
145 149parallel
Strand 6
B
264 272anti-parallel
Strand 7
B
160 174anti-parallel
Strand 8
B
254 256anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 51first strand
Strand 2
B
58 59anti-parallel
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