Analysis of interatomic Contacts of Structural Units in PDB entry:
7DXH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7DXH entry

There are 13 chains in PDB entry 7DXH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 5	SER 113
B	GLY 9	SER 56
a	ASN 12	GLU 333
b	GLY 2	PHE 495
d	GLY 13	ALA 351
e	VAL 21	LEU 83
f	THR 17	GLN 44
h	ALA 2	LYS 63
i	MET 1	ALA 29
l	MET 1	ASN 37
m	VAL 3	GLN 33
t	MET 1	PRO 27
x	THR 2	THR 2

There are 86 helices in PDB entry 7DXH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	41	46	Right-handed alpha
Helix 2	AA2	A	88	106	Right-handed alpha
Helix 3	AA3	B	27	55	Right-handed alpha
Helix 4	AA4	a	13	23	Right-handed alpha
Helix 5	AA5	a	31	54	Right-handed alpha
Helix 6	AA6	a	70	74	Right-handed 310
Helix 7	AA7	a	101	108	Right-handed alpha
Helix 8	AA8	a	109	138	Right-handed alpha
Helix 9	AA9	a	142	159	Right-handed alpha
Helix 10	AB1	a	159	166	Right-handed alpha
Helix 11	AB2	a	167	171	Right-handed 310
Helix 12	AB3	a	175	191	Right-handed alpha
Helix 13	AB4	a	192	194	Right-handed 310
Helix 14	AB5	a	195	221	Right-handed alpha
Helix 15	AB6	a	270	294	Right-handed alpha
Helix 16	AB7	a	316	332	Right-handed alpha
Helix 17	AB8	b	4	13	Right-handed 310
Helix 18	AB9	b	15	44	Right-handed alpha
Helix 19	AC1	b	62	70	Right-handed alpha
Helix 20	AC2	b	92	117	Right-handed alpha
Helix 21	AC3	b	134	157	Right-handed alpha
Helix 22	AC4	b	186	191	Right-handed 310
Helix 23	AC5	b	195	217	Right-handed alpha
Helix 24	AC6	b	222	229	Right-handed alpha
Helix 25	AC7	b	234	258	Right-handed alpha
Helix 26	AC8	b	272	277	Right-handed alpha
Helix 27	AC9	b	278	293	Right-handed alpha
Helix 28	AD1	b	297	304	Right-handed alpha
Helix 29	AD2	b	306	312	Right-handed alpha
Helix 30	AD3	b	314	318	Right-handed 310
Helix 31	AD4	b	413	425	Right-handed alpha
Helix 32	AD5	b	446	475	Right-handed alpha
Helix 33	AD6	b	475	481	Right-handed alpha
Helix 34	AD7	d	14	23	Right-handed alpha
Helix 35	AD8	d	33	55	Right-handed alpha
Helix 36	AD9	d	82	86	Right-handed 310
Helix 37	AE1	d	100	107	Right-handed alpha
Helix 38	AE2	d	108	137	Right-handed alpha
Helix 39	AE3	d	140	146	Right-handed alpha
Helix 40	AE4	d	146	158	Right-handed alpha
Helix 41	AE5	d	158	164	Right-handed alpha
Helix 42	AE6	d	175	190	Right-handed alpha
Helix 43	AE7	d	191	193	Right-handed 310
Helix 44	AE8	d	194	219	Right-handed alpha
Helix 45	AE9	d	235	239	Right-handed 310
Helix 46	AF1	d	245	256	Right-handed alpha
Helix 47	AF2	d	263	291	Right-handed alpha
Helix 48	AF3	d	298	308	Right-handed alpha
Helix 49	AF4	d	313	334	Right-handed alpha
Helix 50	AF5	e	27	40	Right-handed alpha
Helix 51	AF6	e	42	47	Right-handed alpha
Helix 52	AF7	e	71	80	Right-handed alpha
Helix 53	AF8	f	20	25	Right-handed alpha
Helix 54	AF9	f	27	41	Right-handed alpha
Helix 55	AG1	h	5	11	Right-handed alpha
Helix 56	AG2	h	27	50	Right-handed alpha
Helix 57	AG3	i	2	25	Right-handed alpha
Helix 58	AG4	l	13	37	Right-handed alpha
Helix 59	AG5	m	6	28	Right-handed alpha
Helix 60	AG6	t	2	23	Right-handed alpha
Helix 61	AG7	x	4	35	Right-handed alpha
Helix 62	AG8	c	38	43	Right-handed 310
Helix 63	AG9	c	47	74	Right-handed alpha
Helix 64	AH1	c	88	95	Right-handed alpha
Helix 65	AH2	c	100	104	Right-handed 310
Helix 66	AH3	c	108	125	Right-handed alpha
Helix 67	AH4	c	127	132	Right-handed alpha
Helix 68	AH5	c	156	181	Right-handed alpha
Helix 69	AH6	c	230	249	Right-handed alpha
Helix 70	AH7	c	249	254	Right-handed alpha
Helix 71	AH8	c	270	293	Right-handed alpha
Helix 72	AH9	c	298	303	Right-handed alpha
Helix 73	AI1	c	305	324	Right-handed alpha
Helix 74	AI2	c	377	383	Right-handed alpha
Helix 75	AI3	c	387	397	Right-handed alpha
Helix 76	AI4	c	422	445	Right-handed alpha
Helix 77	AI5	k	18	23	Right-handed alpha
Helix 78	AI6	k	26	31	Right-handed alpha
Helix 79	AI7	k	31	40	Right-handed alpha
Helix 80	AI8	z	3	9	Right-handed alpha
Helix 81	AI9	z	9	14	Right-handed alpha
Helix 82	AJ1	z	17	22	Right-handed alpha
Helix 83	AJ2	z	46	56	Right-handed alpha
Helix 84	AJ3	z	57	59	Right-handed 310
Helix 85	AJ4	y	11	23	Right-handed alpha
Helix 86	AJ5	C	32	51	Right-handed alpha

There are 9 sheets in PDB entry 7DXH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	20	23	first strand
Strand 2	A	34	39	anti-parallel
Strand 3	A	76	84	anti-parallel
Strand 4	A	68	73	anti-parallel
Strand 5	a	249	252	anti-parallel
Strand 6	a	225	227	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	57	first strand
Strand 2	A	62	65	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	22	first strand
Strand 2	h	20	21	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	307	308	first strand
Strand 2	a	312	313	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	166	168	first strand
Strand 2	b	177	179	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	409	411	first strand
Strand 2	b	397	402	anti-parallel
Strand 3	b	336	348	anti-parallel
Strand 4	b	429	433	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	355	356	first strand
Strand 2	b	369	371	anti-parallel
Strand 3	b	377	380	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	341	343	first strand
Strand 2	c	349	351	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	370	371	first strand
Strand 2	c	374	375	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7DXH

Analysis of interatomic Contacts of Structural Units in PDB entry:
7DXH