Analysis of interatomic Contacts of Structural Units in PDB entry:
7DXI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DXI entry

There are 2 chains in PDB entry 7DXI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 60PRO 610
B
 ALA 60PRO 610
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7DXI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
75 85Right-handed alpha
Helix 2
AA2
A
99 102Right-handed 310
Helix 3
AA3
A
103 111Right-handed alpha
Helix 4
AA4
A
141 145Right-handed alpha
Helix 5
AA5
A
155 160Right-handed alpha
Helix 6
AA6
A
161 166Right-handed 310
Helix 7
AA7
A
187 191Right-handed 310
Helix 8
AA8
A
349 364Right-handed alpha
Helix 9
AA9
A
382 390Right-handed alpha
Helix 10
AB1
A
392 401Right-handed alpha
Helix 11
AB2
A
411 417Right-handed alpha
Helix 12
AB3
A
428 435Right-handed alpha
Helix 13
AB4
A
445 455Right-handed alpha
Helix 14
AB5
A
462 476Right-handed alpha
Helix 15
AB6
A
508 515Right-handed alpha
Helix 16
AB7
A
518 524Right-handed alpha
Helix 17
AB8
A
552 566Right-handed alpha
Helix 18
AB9
A
583 600Right-handed alpha
Helix 19
AC1
B
75 85Right-handed alpha
Helix 20
AC2
B
99 102Right-handed 310
Helix 21
AC3
B
103 111Right-handed alpha
Helix 22
AC4
B
141 145Right-handed alpha
Helix 23
AC5
B
155 160Right-handed alpha
Helix 24
AC6
B
161 166Right-handed 310
Helix 25
AC7
B
187 191Right-handed 310
Helix 26
AC8
B
349 364Right-handed alpha
Helix 27
AC9
B
382 390Right-handed alpha
Helix 28
AD1
B
392 401Right-handed alpha
Helix 29
AD2
B
411 417Right-handed alpha
Helix 30
AD3
B
428 435Right-handed alpha
Helix 31
AD4
B
445 455Right-handed alpha
Helix 32
AD5
B
462 476Right-handed alpha
Helix 33
AD6
B
508 515Right-handed alpha
Helix 34
AD7
B
518 524Right-handed alpha
Helix 35
AD8
B
552 566Right-handed alpha
Helix 36
AD9
B
583 600Right-handed alpha
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There are 8 sheets in PDB entry 7DXI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 68first strand
Strand 2
A
117 121parallel
Strand 3
A
136 140parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 174first strand
Strand 2
A
379 381anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 181first strand
Strand 2
A
571 572anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 200first strand
Strand 2
A
535 536parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
66 68first strand
Strand 2
B
117 121parallel
Strand 3
B
136 140parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
172 174first strand
Strand 2
B
379 381anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 181first strand
Strand 2
B
571 572anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
199 200first strand
Strand 2
B
535 536parallel
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