Analysis of interatomic Contacts of Structural Units in PDB entry:
7DXM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DXM entry

There are 4 chains in PDB entry 7DXM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 32LYS 422
B
 SER 33GLU 424
C
 TYR 32LYS 422
D
 SER 33GLU 424
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are101 helices in PDB entry 7DXM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 41Right-handed alpha
Helix 2
AA2
A
45 50Right-handed alpha
Helix 3
AA3
A
51 61Right-handed alpha
Helix 4
AA4
A
72 77Right-handed 310
Helix 5
AA5
A
82 90Right-handed alpha
Helix 6
AA6
A
105 114Right-handed alpha
Helix 7
AA7
A
116 121Right-handed alpha
Helix 8
AA8
A
130 134Right-handed 310
Helix 9
AA9
A
140 146Right-handed alpha
Helix 10
AB1
A
149 159Right-handed alpha
Helix 11
AB2
A
163 177Right-handed alpha
Helix 12
AB3
A
182 191Right-handed alpha
Helix 13
AB4
A
196 222Right-handed alpha
Helix 14
AB5
A
226 232Right-handed alpha
Helix 15
AB6
A
233 239Right-handed 310
Helix 16
AB7
A
244 259Right-handed alpha
Helix 17
AB8
A
268 276Right-handed alpha
Helix 18
AB9
A
279 284Right-handed alpha
Helix 19
AC1
A
296 311Right-handed alpha
Helix 20
AC2
A
323 331Right-handed alpha
Helix 21
AC3
A
333 350Right-handed alpha
Helix 22
AC4
A
360 363Right-handed 310
Helix 23
AC5
A
377 393Right-handed alpha
Helix 24
AC6
A
403 407Right-handed 310
Helix 25
AC7
A
408 414Right-handed alpha
Helix 26
AC8
B
34 44Right-handed alpha
Helix 27
AC9
B
45 50Right-handed alpha
Helix 28
AD1
B
51 61Right-handed alpha
Helix 29
AD2
B
72 77Right-handed 310
Helix 30
AD3
B
82 90Right-handed alpha
Helix 31
AD4
B
105 114Right-handed alpha
Helix 32
AD5
B
115 116Right-handed 310
Helix 33
AD6
B
117 121Right-handed 310
Helix 34
AD7
B
130 134Right-handed 310
Helix 35
AD8
B
140 148Right-handed alpha
Helix 36
AD9
B
149 159Right-handed alpha
Helix 37
AE1
B
163 177Right-handed alpha
Helix 38
AE2
B
182 192Right-handed alpha
Helix 39
AE3
B
196 222Right-handed alpha
Helix 40
AE4
B
226 232Right-handed alpha
Helix 41
AE5
B
233 239Right-handed 310
Helix 42
AE6
B
244 259Right-handed alpha
Helix 43
AE7
B
268 276Right-handed alpha
Helix 44
AE8
B
277 280Right-handed 310
Helix 45
AE9
B
296 311Right-handed alpha
Helix 46
AF1
B
323 331Right-handed alpha
Helix 47
AF2
B
333 350Right-handed alpha
Helix 48
AF3
B
377 393Right-handed alpha
Helix 49
AF4
B
403 407Right-handed 310
Helix 50
AF5
B
408 414Right-handed alpha
Helix 51
AF6
B
418 422Right-handed 310
Helix 52
AF7
C
33 41Right-handed alpha
Helix 53
AF8
C
45 50Right-handed alpha
Helix 54
AF9
C
51 60Right-handed alpha
Helix 55
AG1
C
73 77Right-handed 310
Helix 56
AG2
C
82 90Right-handed alpha
Helix 57
AG3
C
105 115Right-handed alpha
Helix 58
AG4
C
116 121Right-handed alpha
Helix 59
AG5
C
130 134Right-handed 310
Helix 60
AG6
C
140 148Right-handed alpha
Helix 61
AG7
C
149 159Right-handed alpha
Helix 62
AG8
C
163 177Right-handed alpha
Helix 63
AG9
C
182 191Right-handed alpha
Helix 64
AH1
C
196 217Right-handed alpha
Helix 65
AH2
C
226 232Right-handed alpha
Helix 66
AH3
C
233 237Right-handed 310
Helix 67
AH4
C
244 259Right-handed alpha
Helix 68
AH5
C
268 277Right-handed alpha
Helix 69
AH6
C
278 284Right-handed 310
Helix 70
AH7
C
296 312Right-handed alpha
Helix 71
AH8
C
323 330Right-handed alpha
Helix 72
AH9
C
333 350Right-handed alpha
Helix 73
AI1
C
377 393Right-handed alpha
Helix 74
AI2
C
403 407Right-handed 310
Helix 75
AI3
C
408 414Right-handed alpha
Helix 76
AI4
D
34 41Right-handed alpha
Helix 77
AI5
D
45 50Right-handed alpha
Helix 78
AI6
D
51 60Right-handed alpha
Helix 79
AI7
D
72 77Right-handed 310
Helix 80
AI8
D
82 90Right-handed alpha
Helix 81
AI9
D
105 114Right-handed alpha
Helix 82
AJ1
D
116 121Right-handed alpha
Helix 83
AJ2
D
130 134Right-handed 310
Helix 84
AJ3
D
140 148Right-handed alpha
Helix 85
AJ4
D
149 159Right-handed alpha
Helix 86
AJ5
D
163 177Right-handed alpha
Helix 87
AJ6
D
182 191Right-handed alpha
Helix 88
AJ7
D
196 218Right-handed alpha
Helix 89
AJ8
D
226 232Right-handed alpha
Helix 90
AJ9
D
233 239Right-handed 310
Helix 91
AK1
D
244 259Right-handed alpha
Helix 92
AK2
D
268 276Right-handed alpha
Helix 93
AK3
D
279 284Right-handed alpha
Helix 94
AK4
D
296 311Right-handed alpha
Helix 95
AK5
D
323 330Right-handed alpha
Helix 96
AK6
D
333 350Right-handed alpha
Helix 97
AK7
D
360 363Right-handed 310
Helix 98
AK8
D
377 393Right-handed alpha
Helix 99
AK9
D
403 407Right-handed 310
Helix 100
AL1
D
408 414Right-handed alpha
Helix 101
AL2
D
417 421Right-handed 310
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There are 4 sheets in PDB entry 7DXM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 99first strand
Strand 2
A
66 70parallel
Strand 3
A
124 128parallel
Strand 4
A
314 319parallel
Strand 5
A
356 358parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 100first strand
Strand 2
B
66 71parallel
Strand 3
B
124 128parallel
Strand 4
B
314 319parallel
Strand 5
B
356 358parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
95 99first strand
Strand 2
C
66 70parallel
Strand 3
C
124 128parallel
Strand 4
C
314 319parallel
Strand 5
C
356 358parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
95 100first strand
Strand 2
D
66 71parallel
Strand 3
D
124 128parallel
Strand 4
D
314 319parallel
Strand 5
D
355 358parallel
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