Analysis of interatomic Contacts of Structural Units in PDB entry:
7DXO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DXO entry

There are 3 chains in PDB entry 7DXO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 8GLY 275
B
 GLY 8GLY 275
C
 GLY 8GLY 275
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 7DXO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 43Right-handed 310
Helix 2
AA2
A
70 86Right-handed alpha
Helix 3
AA3
A
97 113Right-handed alpha
Helix 4
AA4
A
140 152Right-handed alpha
Helix 5
AA5
A
165 177Right-handed alpha
Helix 6
AA6
A
178 181Right-handed 310
Helix 7
AA7
A
184 202Right-handed alpha
Helix 8
AA8
A
226 235Right-handed alpha
Helix 9
AA9
A
236 238Right-handed 310
Helix 10
AB1
A
253 257Right-handed 310
Helix 11
AB2
A
259 275Right-handed alpha
Helix 12
AB3
B
36 43Right-handed 310
Helix 13
AB4
B
70 86Right-handed alpha
Helix 14
AB5
B
97 113Right-handed alpha
Helix 15
AB6
B
140 152Right-handed alpha
Helix 16
AB7
B
165 177Right-handed alpha
Helix 17
AB8
B
184 202Right-handed alpha
Helix 18
AB9
B
226 235Right-handed alpha
Helix 19
AC1
B
236 238Right-handed 310
Helix 20
AC2
B
253 257Right-handed 310
Helix 21
AC3
B
259 275Right-handed alpha
Helix 22
AC4
C
36 43Right-handed 310
Helix 23
AC5
C
70 86Right-handed alpha
Helix 24
AC6
C
97 113Right-handed alpha
Helix 25
AC7
C
140 152Right-handed alpha
Helix 26
AC8
C
165 177Right-handed alpha
Helix 27
AC9
C
184 202Right-handed alpha
Helix 28
AD1
C
226 235Right-handed alpha
Helix 29
AD2
C
236 238Right-handed 310
Helix 30
AD3
C
253 257Right-handed 310
Helix 31
AD4
C
259 275Right-handed alpha
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There are 3 sheets in PDB entry 7DXO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
14 18first strand
Strand 2
A
52 55anti-parallel
Strand 3
A
26 29parallel
Strand 4
A
90 96parallel
Strand 5
A
116 123parallel
Strand 6
A
214 219parallel
Strand 7
A
245 250parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 18first strand
Strand 2
B
52 55anti-parallel
Strand 3
B
26 29parallel
Strand 4
B
91 96parallel
Strand 5
B
117 123parallel
Strand 6
B
214 219parallel
Strand 7
B
245 250parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
14 18first strand
Strand 2
C
52 55anti-parallel
Strand 3
C
26 29parallel
Strand 4
C
91 96parallel
Strand 5
C
117 123parallel
Strand 6
C
214 219parallel
Strand 7
C
245 250parallel
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