Analysis of interatomic Contacts of Structural Units in PDB entry:
7DZ7

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7DZ7 entry

Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 31 chains in PDB entry 7DZ7 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 11	GLY 751
B	ALA 2	PHE 734
C	ALA 2	TYR 81
D	TRP 53	GLU 195
E	GLU 34	ALA 96
F	ASP 63	ARG 227
G	LEU 32	LEU 125
H	LYS 31	LEU 130
I	ALA 63	PRO 104
J	MET 1	PHE 41
K	GLY 28	LEU 113
L	LYS 38	SER 196
O	GLU 30	TRP 126
a	LYS 35	PHE 228
1	LYS 35	PHE 228
2	ARG 28	ASN 244
3	GLN 44	ALA 263
4	ASP 55	LEU 264
5	ASP 31	GLN 257
6	SER 28	PRO 257
7	VAL 29	ALA 241
8	ARG 28	LEU 244
9	ARG 28	LEU 210
X	ILE 30	ALA 249
Y	GLY 37	SER 256
Z	ARG 25	ARG 26
Z	VAL 28	GLN 256
U	GLU 39	ALA 257
V	LYS 31	LYS 32
V	ILE 34	GLN 268
W	ILE 30	ALA 249

There are223 helices in PDB entry 7DZ7. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	45	55	Right-handed alpha
Helix 2	AA2	A	58	63	Right-handed alpha
Helix 3	AA3	A	65	98	Right-handed alpha
Helix 4	AA4	A	100	107	Right-handed alpha
Helix 5	AA5	A	123	127	Right-handed 310
Helix 6	AA6	A	143	152	Right-handed alpha
Helix 7	AA7	A	155	183	Right-handed alpha
Helix 8	AA8	A	187	192	Right-handed alpha
Helix 9	AA9	A	193	204	Right-handed alpha
Helix 10	AB1	A	206	220	Right-handed alpha
Helix 11	AB2	A	220	229	Right-handed alpha
Helix 12	AB3	A	239	246	Right-handed alpha
Helix 13	AB4	A	246	254	Right-handed alpha
Helix 14	AB5	A	255	260	Right-handed 310
Helix 15	AB6	A	261	266	Right-handed alpha
Helix 16	AB7	A	268	275	Right-handed 310
Helix 17	AB8	A	290	309	Right-handed alpha
Helix 18	AB9	A	321	329	Right-handed alpha
Helix 19	AC1	A	340	348	Right-handed alpha
Helix 20	AC2	A	348	374	Right-handed alpha
Helix 21	AC3	A	383	416	Right-handed alpha
Helix 22	AC4	A	425	433	Right-handed alpha
Helix 23	AC5	A	433	466	Right-handed alpha
Helix 24	AC6	A	467	471	Right-handed 310
Helix 25	AC7	A	481	493	Right-handed alpha
Helix 26	AC8	A	529	556	Right-handed alpha
Helix 27	AC9	A	565	570	Right-handed alpha
Helix 28	AD1	A	587	618	Right-handed alpha
Helix 29	AD2	A	634	639	Right-handed alpha
Helix 30	AD3	A	641	649	Right-handed alpha
Helix 31	AD4	A	652	657	Right-handed 310
Helix 32	AD5	A	665	687	Right-handed alpha
Helix 33	AD6	A	689	707	Right-handed alpha
Helix 34	AD7	A	719	751	Right-handed alpha
Helix 35	AD8	B	10	15	Right-handed alpha
Helix 36	AD9	B	19	28	Right-handed alpha
Helix 37	AE1	B	31	35	Right-handed 310
Helix 38	AE2	B	39	72	Right-handed alpha
Helix 39	AE3	B	74	79	Right-handed alpha
Helix 40	AE4	B	98	105	Right-handed alpha
Helix 41	AE5	B	120	128	Right-handed alpha
Helix 42	AE6	B	132	157	Right-handed alpha
Helix 43	AE7	B	158	163	Right-handed 310
Helix 44	AE8	B	165	170	Right-handed alpha
Helix 45	AE9	B	171	182	Right-handed alpha
Helix 46	AF1	B	184	198	Right-handed alpha
Helix 47	AF2	B	198	204	Right-handed alpha
Helix 48	AF3	B	223	228	Right-handed alpha
Helix 49	AF4	B	230	236	Right-handed 310
Helix 50	AF5	B	270	289	Right-handed alpha
Helix 51	AF6	B	301	309	Right-handed alpha
Helix 52	AF7	B	311	315	Right-handed 310
Helix 53	AF8	B	322	330	Right-handed alpha
Helix 54	AF9	B	330	356	Right-handed alpha
Helix 55	AG1	B	365	398	Right-handed alpha
Helix 56	AG2	B	407	415	Right-handed alpha
Helix 57	AG3	B	415	447	Right-handed alpha
Helix 58	AG4	B	449	453	Right-handed 310
Helix 59	AG5	B	458	468	Right-handed alpha
Helix 60	AG6	B	484	489	Right-handed alpha
Helix 61	AG7	B	494	503	Right-handed alpha
Helix 62	AG8	B	514	541	Right-handed alpha
Helix 63	AG9	B	550	555	Right-handed 310
Helix 64	AH1	B	572	604	Right-handed alpha
Helix 65	AH2	B	606	614	Right-handed alpha
Helix 66	AH3	B	616	624	Right-handed alpha
Helix 67	AH4	B	628	634	Right-handed alpha
Helix 68	AH5	B	644	667	Right-handed alpha
Helix 69	AH6	B	670	685	Right-handed alpha
Helix 70	AH7	B	702	734	Right-handed alpha
Helix 71	AH8	C	15	21	Right-handed alpha
Helix 72	AH9	C	44	48	Right-handed 310
Helix 73	AI1	D	75	81	Right-handed alpha
Helix 74	AI2	D	117	132	Right-handed alpha
Helix 75	AI3	D	174	178	Right-handed 310
Helix 76	AI4	F	73	92	Right-handed alpha
Helix 77	AI5	F	98	121	Right-handed alpha
Helix 78	AI6	F	149	175	Right-handed alpha
Helix 79	AI7	F	181	186	Right-handed alpha
Helix 80	AI8	F	188	199	Right-handed alpha
Helix 81	AI9	F	201	212	Right-handed alpha
Helix 82	AJ1	G	33	51	Right-handed alpha
Helix 83	AJ2	G	53	62	Right-handed alpha
Helix 84	AJ3	G	75	80	Right-handed alpha
Helix 85	AJ4	G	96	120	Right-handed alpha
Helix 86	AJ5	H	43	49	Right-handed alpha
Helix 87	AJ6	H	63	74	Right-handed alpha
Helix 88	AJ7	H	79	101	Right-handed alpha
Helix 89	AJ8	H	101	106	Right-handed alpha
Helix 90	AJ9	H	108	113	Right-handed alpha
Helix 91	AK1	I	74	83	Right-handed alpha
Helix 92	AK2	I	86	98	Right-handed alpha
Helix 93	AK3	J	2	9	Right-handed alpha
Helix 94	AK4	J	10	33	Right-handed alpha
Helix 95	AK5	K	32	51	Right-handed alpha
Helix 96	AK6	K	85	110	Right-handed alpha
Helix 97	AK7	L	57	62	Right-handed alpha
Helix 98	AK8	L	62	71	Right-handed alpha
Helix 99	AK9	L	72	76	Right-handed 310
Helix 100	AL1	L	80	96	Right-handed alpha
Helix 101	AL2	L	96	104	Right-handed alpha
Helix 102	AL3	L	111	140	Right-handed alpha
Helix 103	AL4	L	163	192	Right-handed alpha
Helix 104	AL5	O	45	57	Right-handed alpha
Helix 105	AL6	O	58	61	Right-handed 310
Helix 106	AL7	O	70	84	Right-handed alpha
Helix 107	AL8	O	95	123	Right-handed alpha
Helix 108	AL9	a	67	98	Right-handed alpha
Helix 109	AM1	a	105	110	Right-handed 310
Helix 110	AM2	a	126	147	Right-handed alpha
Helix 111	AM3	a	167	199	Right-handed alpha
Helix 112	AM4	a	201	212	Right-handed alpha
Helix 113	AM5	1	67	98	Right-handed alpha
Helix 114	AM6	1	105	110	Right-handed 310
Helix 115	AM7	1	126	147	Right-handed alpha
Helix 116	AM8	1	167	199	Right-handed alpha
Helix 117	AM9	1	201	212	Right-handed alpha
Helix 118	AN1	2	59	90	Right-handed alpha
Helix 119	AN2	2	97	101	Right-handed 310
Helix 120	AN3	2	106	132	Right-handed alpha
Helix 121	AN4	2	150	177	Right-handed alpha
Helix 122	AN5	2	181	192	Right-handed alpha
Helix 123	AN6	2	197	201	Right-handed 310
Helix 124	AN7	2	203	228	Right-handed alpha
Helix 125	AN8	3	52	56	Right-handed 310
Helix 126	AN9	3	83	105	Right-handed alpha
Helix 127	AO1	3	106	114	Right-handed alpha
Helix 128	AO2	3	124	128	Right-handed 310
Helix 129	AO3	3	131	135	Right-handed 310
Helix 130	AO4	3	143	168	Right-handed alpha
Helix 131	AO5	3	179	183	Right-handed 310
Helix 132	AO6	3	206	239	Right-handed alpha
Helix 133	AO7	3	241	252	Right-handed alpha
Helix 134	AO8	4	89	124	Right-handed alpha
Helix 135	AO9	4	133	137	Right-handed 310
Helix 136	AP1	4	145	170	Right-handed alpha
Helix 137	AP2	4	195	199	Right-handed 310
Helix 138	AP3	4	207	236	Right-handed alpha
Helix 139	AP4	4	239	250	Right-handed alpha
Helix 140	AP5	4	255	264	Right-handed alpha
Helix 141	AP6	5	59	62	Right-handed 310
Helix 142	AP7	5	63	95	Right-handed alpha
Helix 143	AP8	5	105	109	Right-handed 310
Helix 144	AP9	5	117	142	Right-handed alpha
Helix 145	AQ1	5	166	170	Right-handed 310
Helix 146	AQ2	5	178	207	Right-handed alpha
Helix 147	AQ3	5	210	221	Right-handed alpha
Helix 148	AQ4	6	60	92	Right-handed alpha
Helix 149	AQ5	6	109	134	Right-handed alpha
Helix 150	AQ6	6	158	162	Right-handed 310
Helix 151	AQ7	6	168	197	Right-handed alpha
Helix 152	AQ8	6	200	211	Right-handed alpha
Helix 153	AQ9	7	61	96	Right-handed alpha
Helix 154	AR1	7	104	113	Right-handed alpha
Helix 155	AR2	7	116	141	Right-handed alpha
Helix 156	AR3	7	154	158	Right-handed 310
Helix 157	AR4	7	166	171	Right-handed alpha
Helix 158	AR5	7	179	212	Right-handed alpha
Helix 159	AR6	7	214	225	Right-handed alpha
Helix 160	AR7	7	230	234	Right-handed 310
Helix 161	AR8	8	38	42	Right-handed 310
Helix 162	AR9	8	43	48	Right-handed alpha
Helix 163	AS1	8	63	97	Right-handed alpha
Helix 164	AS2	8	107	115	Right-handed alpha
Helix 165	AS3	8	119	144	Right-handed alpha
Helix 166	AS4	8	156	162	Right-handed 310
Helix 167	AS5	8	171	175	Right-handed 310
Helix 168	AS6	8	185	215	Right-handed alpha
Helix 169	AS7	8	217	228	Right-handed alpha
Helix 170	AS8	9	60	90	Right-handed alpha
Helix 171	AS9	9	107	128	Right-handed alpha
Helix 172	AT1	9	151	176	Right-handed alpha
Helix 173	AT2	9	182	193	Right-handed alpha
Helix 174	AT3	9	198	204	Right-handed alpha
Helix 175	AT4	9	205	210	Right-handed alpha
Helix 176	AT5	X	41	45	Right-handed 310
Helix 177	AT6	X	71	105	Right-handed alpha
Helix 178	AT7	X	113	117	Right-handed 310
Helix 179	AT8	X	118	123	Right-handed 310
Helix 180	AT9	X	140	162	Right-handed alpha
Helix 181	AU1	X	186	219	Right-handed alpha
Helix 182	AU2	X	221	232	Right-handed alpha
Helix 183	AU3	X	237	246	Right-handed 310
Helix 184	AU4	Y	49	53	Right-handed 310
Helix 185	AU5	Y	79	114	Right-handed alpha
Helix 186	AU6	Y	121	125	Right-handed 310
Helix 187	AU7	Y	126	131	Right-handed 310
Helix 188	AU8	Y	148	170	Right-handed alpha
Helix 189	AU9	Y	194	227	Right-handed alpha
Helix 190	AV1	Y	229	240	Right-handed alpha
Helix 191	AV2	Y	245	254	Right-handed 310
Helix 192	AV3	Z	50	54	Right-handed 310
Helix 193	AV4	Z	79	112	Right-handed alpha
Helix 194	AV5	Z	121	126	Right-handed alpha
Helix 195	AV6	Z	127	131	Right-handed 310
Helix 196	AV7	Z	136	140	Right-handed 310
Helix 197	AV8	Z	149	169	Right-handed alpha
Helix 198	AV9	Z	183	187	Right-handed 310
Helix 199	AW1	Z	194	225	Right-handed alpha
Helix 200	AW2	Z	229	240	Right-handed alpha
Helix 201	AW3	Z	245	250	Right-handed 310
Helix 202	AW4	U	49	54	Right-handed 310
Helix 203	AW5	U	79	113	Right-handed alpha
Helix 204	AW6	U	121	129	Right-handed 310
Helix 205	AW7	U	148	170	Right-handed alpha
Helix 206	AW8	U	194	227	Right-handed alpha
Helix 207	AW9	U	229	240	Right-handed alpha
Helix 208	AX1	U	245	253	Right-handed 310
Helix 209	AX2	V	33	38	Right-handed alpha
Helix 210	AX3	V	61	65	Right-handed 310
Helix 211	AX4	V	90	115	Right-handed alpha
Helix 212	AX5	V	116	125	Right-handed alpha
Helix 213	AX6	V	132	142	Right-handed 310
Helix 214	AX7	V	159	181	Right-handed alpha
Helix 215	AX8	V	206	238	Right-handed alpha
Helix 216	AX9	V	241	252	Right-handed alpha
Helix 217	AY1	W	41	45	Right-handed 310
Helix 218	AY2	W	71	105	Right-handed alpha
Helix 219	AY3	W	113	121	Right-handed 310
Helix 220	AY4	W	140	162	Right-handed alpha
Helix 221	AY5	W	186	219	Right-handed alpha
Helix 222	AY6	W	221	232	Right-handed alpha
Helix 223	AY7	W	237	245	Right-handed 310

There are 18 sheets in PDB entry 7DZ7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	19	first strand
Strand 2	A	184	186	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	129	130	first strand
Strand 2	A	136	137	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	515	517	first strand
Strand 2	A	520	523	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	620	622	first strand
Strand 2	A	627	629	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	88	91	first strand
Strand 2	B	114	116	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	636	637	first strand
Strand 2	B	640	641	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	7	first strand
Strand 2	C	65	68	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	38	41	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	109	115	first strand
Strand 2	D	83	90	anti-parallel
Strand 3	D	137	141	anti-parallel
Strand 4	D	147	149	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	94	97	first strand
Strand 2	D	103	106	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	85	88	first strand
Strand 2	E	71	74	anti-parallel
Strand 3	E	56	62	anti-parallel
Strand 4	E	42	45	anti-parallel
Strand 5	E	93	95	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	68	69	first strand
Strand 2	F	124	125	anti-parallel
Strand 3	F	131	132	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	59	61	first strand
Strand 2	K	67	69	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	a	117	118	first strand
Strand 2	a	121	122	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	1	117	118	first strand
Strand 2	1	121	122	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	5	240	242	first strand
Strand 2	5	245	247	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	222	224	first strand
Strand 2	6	227	229	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	6	238	239	first strand
Strand 2	6	246	247	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7DZ7

Analysis of interatomic Contacts of Structural Units in PDB entry:
7DZ7