Analysis of interatomic Contacts of Structural Units in PDB entry:
7DZT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7DZT entry

There are 2 chains in PDB entry 7DZT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 27LEU 293
B
 THR 27LEU 293
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 7DZT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 43Right-handed alpha
Helix 2
AA2
A
88 93Right-handed alpha
Helix 3
AA3
A
94 101Right-handed alpha
Helix 4
AA4
A
117 137Right-handed alpha
Helix 5
AA5
A
158 171Right-handed alpha
Helix 6
AA6
A
207 210Right-handed 310
Helix 7
AA7
A
211 219Right-handed alpha
Helix 8
AA8
A
243 260Right-handed alpha
Helix 9
AA9
A
262 264Right-handed 310
Helix 10
AB1
A
265 271Right-handed alpha
Helix 11
AB2
A
271 277Right-handed alpha
Helix 12
AB3
A
278 280Right-handed 310
Helix 13
AB4
B
37 43Right-handed alpha
Helix 14
AB5
B
88 93Right-handed alpha
Helix 15
AB6
B
94 101Right-handed alpha
Helix 16
AB7
B
117 136Right-handed alpha
Helix 17
AB8
B
158 171Right-handed alpha
Helix 18
AB9
B
211 219Right-handed alpha
Helix 19
AC1
B
243 260Right-handed alpha
Helix 20
AC2
B
266 271Right-handed alpha
Helix 21
AC3
B
271 276Right-handed alpha
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There are 4 sheets in PDB entry 7DZT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 54first strand
Strand 2
A
63 69anti-parallel
Strand 3
A
105 110anti-parallel
Strand 4
A
76 82parallel
Strand 5
A
147 157parallel
Strand 6
A
176 180parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 200first strand
Strand 2
A
224 229parallel
Strand 3
A
283 288anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 54first strand
Strand 2
B
63 69anti-parallel
Strand 3
B
105 110anti-parallel
Strand 4
B
76 82parallel
Strand 5
B
147 156parallel
Strand 6
B
176 177parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 200first strand
Strand 2
B
224 229parallel
Strand 3
B
283 288anti-parallel
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