Analysis of interatomic Contacts of Structural Units in PDB entry:
7E01


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E01 entry

There is 1 chain in PDB entry 7E01 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 7E01. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 19Right-handed alpha
Helix 2
AA2
A
28 46Right-handed alpha
Helix 3
AA3
A
65 68Right-handed 310
Helix 4
AA4
A
69 76Right-handed alpha
Helix 5
AA5
A
81 90Right-handed alpha
Helix 6
AA6
A
115 125Right-handed alpha
Helix 7
AA7
A
169 173Right-handed 310
Helix 8
AA8
A
182 194Right-handed alpha
Helix 9
AA9
A
240 244Right-handed 310
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There are 3 sheets in PDB entry 7E01. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
20 23first strand
Strand 2
A
205 209anti-parallel
Strand 3
A
131 137anti-parallel
Strand 4
A
227 234anti-parallel
Strand 5
A
93 101anti-parallel
Strand 6
A
59 63anti-parallel
Strand 7
A
50 52anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 114first strand
Strand 2
A
214 216anti-parallel
Strand 3
A
149 150anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 164first strand
Strand 2
A
179 180anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il