Analysis of interatomic Contacts of Structural Units in PDB entry:
7E0J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E0J entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 4 chains in PDB entry 7E0J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 ILE 30ALA 249
Y
 GLY 37SER 256
Z
 ARG 25ARG 26
Z
 VAL 28GLN 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 7E0J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
X
41 45Right-handed 310
Helix 2
AA2
X
71 105Right-handed alpha
Helix 3
AA3
X
113 117Right-handed 310
Helix 4
AA4
X
118 123Right-handed 310
Helix 5
AA5
X
140 162Right-handed alpha
Helix 6
AA6
X
186 219Right-handed alpha
Helix 7
AA7
X
221 232Right-handed alpha
Helix 8
AA8
X
237 246Right-handed 310
Helix 9
AA9
Y
49 53Right-handed 310
Helix 10
AB1
Y
79 113Right-handed alpha
Helix 11
AB2
Y
121 125Right-handed 310
Helix 12
AB3
Y
126 131Right-handed 310
Helix 13
AB4
Y
148 170Right-handed alpha
Helix 14
AB5
Y
194 227Right-handed alpha
Helix 15
AB6
Y
229 240Right-handed alpha
Helix 16
AB7
Y
245 254Right-handed 310
Helix 17
AB8
Z
50 54Right-handed 310
Helix 18
AB9
Z
79 112Right-handed alpha
Helix 19
AC1
Z
121 126Right-handed alpha
Helix 20
AC2
Z
127 131Right-handed 310
Helix 21
AC3
Z
136 140Right-handed 310
Helix 22
AC4
Z
149 169Right-handed alpha
Helix 23
AC5
Z
183 187Right-handed 310
Helix 24
AC6
Z
194 225Right-handed alpha
Helix 25
AC7
Z
229 240Right-handed alpha
Helix 26
AC8
Z
245 250Right-handed 310
Back to top of page
There are no sheets in PDB entry 7E0J
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il