Analysis of interatomic Contacts of Structural Units in PDB entry:
7E0L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7E0L entry

There are 5 chains in PDB entry 7E0L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLY 346
A	ASP 348	GLU 491
B	TYR 3	GLY 346
B	ASP 348	ASP 493
K	MET 1	LEU 305

There are 96 helices in PDB entry 7E0L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	28	32	Right-handed 310
Helix 2	AA2	A	44	46	Right-handed 310
Helix 3	AA3	A	73	77	Right-handed 310
Helix 4	AA4	A	88	114	Right-handed alpha
Helix 5	AA5	A	119	133	Right-handed alpha
Helix 6	AA6	A	140	171	Right-handed alpha
Helix 7	AA7	A	194	205	Right-handed alpha
Helix 8	AA8	A	218	223	Right-handed 310
Helix 9	AA9	A	224	229	Right-handed alpha
Helix 10	AB1	A	240	242	Right-handed 310
Helix 11	AB2	A	243	251	Right-handed alpha
Helix 12	AB3	A	269	271	Right-handed 310
Helix 13	AB4	A	292	302	Right-handed alpha
Helix 14	AB5	A	318	324	Right-handed alpha
Helix 15	AB6	A	325	336	Right-handed alpha
Helix 16	AB7	A	351	353	Right-handed 310
Helix 17	AB8	A	354	363	Right-handed alpha
Helix 18	AB9	A	374	380	Right-handed 310
Helix 19	AC1	A	399	401	Right-handed 310
Helix 20	AC2	A	402	417	Right-handed alpha
Helix 21	AC3	A	420	424	Right-handed 310
Helix 22	AC4	A	434	447	Right-handed alpha
Helix 23	AC5	A	463	474	Right-handed alpha
Helix 24	AC6	A	481	490	Right-handed alpha
Helix 25	AC7	B	28	32	Right-handed 310
Helix 26	AC8	B	73	77	Right-handed 310
Helix 27	AC9	B	88	114	Right-handed alpha
Helix 28	AD1	B	119	133	Right-handed alpha
Helix 29	AD2	B	140	171	Right-handed alpha
Helix 30	AD3	B	194	205	Right-handed alpha
Helix 31	AD4	B	216	223	Right-handed 310
Helix 32	AD5	B	224	229	Right-handed alpha
Helix 33	AD6	B	240	242	Right-handed 310
Helix 34	AD7	B	243	251	Right-handed alpha
Helix 35	AD8	B	269	271	Right-handed 310
Helix 36	AD9	B	292	302	Right-handed alpha
Helix 37	AE1	B	318	324	Right-handed alpha
Helix 38	AE2	B	325	336	Right-handed alpha
Helix 39	AE3	B	351	353	Right-handed 310
Helix 40	AE4	B	354	363	Right-handed alpha
Helix 41	AE5	B	374	380	Right-handed 310
Helix 42	AE6	B	399	401	Right-handed 310
Helix 43	AE7	B	402	417	Right-handed alpha
Helix 44	AE8	B	420	424	Right-handed 310
Helix 45	AE9	B	434	447	Right-handed alpha
Helix 46	AF1	B	463	474	Right-handed alpha
Helix 47	AF2	B	481	490	Right-handed alpha
Helix 48	AF3	K	28	32	Right-handed 310
Helix 49	AF4	K	44	46	Right-handed 310
Helix 50	AF5	K	73	77	Right-handed 310
Helix 51	AF6	K	88	114	Right-handed alpha
Helix 52	AF7	K	119	133	Right-handed alpha
Helix 53	AF8	K	140	171	Right-handed alpha
Helix 54	AF9	K	194	205	Right-handed alpha
Helix 55	AG1	K	216	223	Right-handed 310
Helix 56	AG2	K	224	229	Right-handed alpha
Helix 57	AG3	K	240	242	Right-handed 310
Helix 58	AG4	K	243	251	Right-handed alpha
Helix 59	AG5	K	269	271	Right-handed 310
Helix 60	AG6	K	292	302	Right-handed alpha
Helix 61	AG7	K	318	324	Right-handed alpha
Helix 62	AG8	K	325	336	Right-handed alpha
Helix 63	AG9	K	351	353	Right-handed 310
Helix 64	AH1	K	354	363	Right-handed alpha
Helix 65	AH2	K	374	380	Right-handed 310
Helix 66	AH3	K	399	401	Right-handed 310
Helix 67	AH4	K	402	417	Right-handed alpha
Helix 68	AH5	K	420	424	Right-handed 310
Helix 69	AH6	K	434	447	Right-handed alpha
Helix 70	AH7	K	463	474	Right-handed alpha
Helix 71	AH8	K	481	490	Right-handed alpha
Helix 72	AH9	M	18	22	Right-handed 310
Helix 73	AI1	M	28	32	Right-handed 310
Helix 74	AI2	M	44	46	Right-handed 310
Helix 75	AI3	M	73	77	Right-handed 310
Helix 76	AI4	M	88	114	Right-handed alpha
Helix 77	AI5	M	119	133	Right-handed alpha
Helix 78	AI6	M	140	171	Right-handed alpha
Helix 79	AI7	M	194	205	Right-handed alpha
Helix 80	AI8	M	216	223	Right-handed 310
Helix 81	AI9	M	224	229	Right-handed alpha
Helix 82	AJ1	M	240	242	Right-handed 310
Helix 83	AJ2	M	243	251	Right-handed alpha
Helix 84	AJ3	M	269	271	Right-handed 310
Helix 85	AJ4	M	292	302	Right-handed alpha
Helix 86	AJ5	M	318	324	Right-handed alpha
Helix 87	AJ6	M	325	336	Right-handed alpha
Helix 88	AJ7	M	351	353	Right-handed 310
Helix 89	AJ8	M	354	363	Right-handed alpha
Helix 90	AJ9	M	374	380	Right-handed 310
Helix 91	AK1	M	399	401	Right-handed 310
Helix 92	AK2	M	402	417	Right-handed alpha
Helix 93	AK3	M	420	424	Right-handed 310
Helix 94	AK4	M	434	447	Right-handed alpha
Helix 95	AK5	M	463	474	Right-handed alpha
Helix 96	AK6	M	481	490	Right-handed alpha

There are 18 sheets in PDB entry 7E0L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	11	12	first strand
Strand 2	A	3	5	anti-parallel
Strand 3	A	48	50	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	180	first strand
Strand 2	A	311	315	anti-parallel

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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	233	236	first strand
Strand 2	A	211	214	parallel
Strand 3	A	187	191	parallel
Strand 4	A	254	257	parallel
Strand 5	A	273	275	parallel
Strand 6	A	285	286	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	394	396	first strand
Strand 2	A	368	372	parallel
Strand 3	A	340	345	parallel
Strand 4	A	426	431	parallel
Strand 5	A	453	455	parallel
Strand 6	A	477	478	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	5	first strand
Strand 2	B	48	49	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	180	first strand
Strand 2	B	311	315	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	233	236	first strand
Strand 2	B	211	215	parallel
Strand 3	B	187	191	parallel
Strand 4	B	254	257	parallel
Strand 5	B	273	275	parallel
Strand 6	B	285	286	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	394	396	first strand
Strand 2	B	368	372	parallel
Strand 3	B	340	346	parallel
Strand 4	B	426	431	parallel
Strand 5	B	453	455	parallel
Strand 6	B	477	478	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	387	388	first strand
Strand 2	B	391	392	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	11	12	first strand
Strand 2	K	3	5	anti-parallel
Strand 3	K	48	50	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	176	180	first strand
Strand 2	K	311	315	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	233	236	first strand
Strand 2	K	211	215	parallel
Strand 3	K	187	191	parallel
Strand 4	K	254	257	parallel
Strand 5	K	273	275	parallel
Strand 6	K	285	286	parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	394	396	first strand
Strand 2	K	368	372	parallel
Strand 3	K	340	345	parallel
Strand 4	K	426	431	parallel
Strand 5	K	453	455	parallel
Strand 6	K	477	478	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	11	12	first strand
Strand 2	M	3	5	anti-parallel
Strand 3	M	48	50	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	176	180	first strand
Strand 2	M	311	315	anti-parallel

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There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	233	236	first strand
Strand 2	M	211	215	parallel
Strand 3	M	187	191	parallel
Strand 4	M	254	257	parallel
Strand 5	M	273	275	parallel
Strand 6	M	285	286	parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	394	396	first strand
Strand 2	M	368	372	parallel
Strand 3	M	340	346	parallel
Strand 4	M	426	431	parallel
Strand 5	M	453	455	parallel
Strand 6	M	477	478	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	387	388	first strand
Strand 2	M	391	392	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7E0L

Analysis of interatomic Contacts of Structural Units in PDB entry:
7E0L