Analysis of interatomic Contacts of Structural Units in PDB entry:
7E0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E0M entry

There are 2 chains in PDB entry 7E0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -4GLU 383
B
 HIS 0GLU 383
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7E0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
26 37Right-handed alpha
Helix 2
AA2
A
55 70Right-handed alpha
Helix 3
AA3
A
81 86Right-handed 310
Helix 4
AA4
A
87 96Right-handed alpha
Helix 5
AA5
A
107 112Right-handed alpha
Helix 6
AA6
A
137 140Right-handed 310
Helix 7
AA7
A
151 174Right-handed alpha
Helix 8
AA8
A
199 203Right-handed 310
Helix 9
AA9
A
210 221Right-handed alpha
Helix 10
AB1
A
238 242Right-handed 310
Helix 11
AB2
A
247 259Right-handed alpha
Helix 12
AB3
A
270 273Right-handed 310
Helix 13
AB4
A
275 285Right-handed alpha
Helix 14
AB5
A
332 337Right-handed alpha
Helix 15
AB6
A
346 362Right-handed alpha
Helix 16
AB7
B
26 37Right-handed alpha
Helix 17
AB8
B
55 70Right-handed alpha
Helix 18
AB9
B
81 86Right-handed 310
Helix 19
AC1
B
87 96Right-handed alpha
Helix 20
AC2
B
106 110Right-handed 310
Helix 21
AC3
B
137 140Right-handed 310
Helix 22
AC4
B
151 174Right-handed alpha
Helix 23
AC5
B
199 203Right-handed 310
Helix 24
AC6
B
210 220Right-handed alpha
Helix 25
AC7
B
238 242Right-handed 310
Helix 26
AC8
B
247 259Right-handed alpha
Helix 27
AC9
B
270 273Right-handed 310
Helix 28
AD1
B
275 285Right-handed alpha
Helix 29
AD2
B
346 362Right-handed alpha
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There are 8 sheets in PDB entry 7E0M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 4first strand
Strand 2
A
7 12anti-parallel
Strand 3
A
142 149anti-parallel
Strand 4
A
126 130anti-parallel
Strand 5
A
119 122anti-parallel
Strand 6
A
41 46anti-parallel
Strand 7
A
73 79parallel
Strand 8
A
100 105parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 4first strand
Strand 2
A
7 12anti-parallel
Strand 3
A
142 149anti-parallel
Strand 4
A
309 310parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 50first strand
Strand 2
A
134 135parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 209first strand
Strand 2
A
193 198parallel
Strand 3
A
339 344anti-parallel
Strand 4
A
321 325anti-parallel
Strand 5
A
314 317anti-parallel
Strand 6
A
224 228anti-parallel
Strand 7
A
262 268parallel
Strand 8
A
289 294parallel
Strand 9
A
366 368anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 4first strand
Strand 2
B
7 12anti-parallel
Strand 3
B
142 149anti-parallel
Strand 4
B
126 130anti-parallel
Strand 5
B
119 122anti-parallel
Strand 6
B
41 46anti-parallel
Strand 7
B
73 79parallel
Strand 8
B
100 105parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 4first strand
Strand 2
B
7 12anti-parallel
Strand 3
B
142 149anti-parallel
Strand 4
B
309 310parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 50first strand
Strand 2
B
134 135parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 209first strand
Strand 2
B
193 198parallel
Strand 3
B
339 344anti-parallel
Strand 4
B
321 325anti-parallel
Strand 5
B
314 317anti-parallel
Strand 6
B
224 228anti-parallel
Strand 7
B
262 268parallel
Strand 8
B
289 294parallel
Strand 9
B
366 368anti-parallel
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