Analysis of interatomic Contacts of Structural Units in PDB entry:
7E15

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7E15 entry

There are 6 chains in PDB entry 7E15 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLN 467
B	VAL 134	LEU 188
C	MET 1	ILE 61
D	MET 1	LEU 464
E	VAL 134	LEU 188
F	MET 1	ILE 61

There are 59 helices in PDB entry 7E15. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	2	23	Right-handed alpha
Helix 2	AA2	A	34	51	Right-handed alpha
Helix 3	AA3	A	64	74	Right-handed alpha
Helix 4	AA4	A	85	87	Right-handed 310
Helix 5	AA5	A	88	96	Right-handed alpha
Helix 6	AA6	A	124	128	Right-handed 310
Helix 7	AA7	A	136	149	Right-handed alpha
Helix 8	AA8	A	150	154	Right-handed 310
Helix 9	AA9	A	155	166	Right-handed alpha
Helix 10	AB1	A	177	188	Right-handed alpha
Helix 11	AB2	A	206	213	Right-handed alpha
Helix 12	AB3	A	225	236	Right-handed alpha
Helix 13	AB4	A	243	247	Right-handed 310
Helix 14	AB5	A	248	266	Right-handed alpha
Helix 15	AB6	A	269	275	Right-handed alpha
Helix 16	AB7	A	290	293	Right-handed 310
Helix 17	AB8	A	294	308	Right-handed alpha
Helix 18	AB9	A	310	319	Right-handed alpha
Helix 19	AC1	A	321	332	Right-handed alpha
Helix 20	AC2	A	339	349	Right-handed alpha
Helix 21	AC3	A	372	382	Right-handed alpha
Helix 22	AC4	A	412	417	Right-handed alpha
Helix 23	AC5	A	421	434	Right-handed alpha
Helix 24	AC6	A	452	466	Right-handed alpha
Helix 25	AC7	B	169	178	Right-handed alpha
Helix 26	AC8	C	2	9	Right-handed alpha
Helix 27	AC9	C	14	22	Right-handed alpha
Helix 28	AD1	C	30	41	Right-handed alpha
Helix 29	AD2	C	47	58	Right-handed alpha
Helix 30	AD3	D	2	23	Right-handed alpha
Helix 31	AD4	D	34	51	Right-handed alpha
Helix 32	AD5	D	64	74	Right-handed alpha
Helix 33	AD6	D	88	96	Right-handed alpha
Helix 34	AD7	D	124	128	Right-handed 310
Helix 35	AD8	D	136	149	Right-handed alpha
Helix 36	AD9	D	150	154	Right-handed 310
Helix 37	AE1	D	155	166	Right-handed alpha
Helix 38	AE2	D	176	188	Right-handed alpha
Helix 39	AE3	D	206	213	Right-handed alpha
Helix 40	AE4	D	225	236	Right-handed alpha
Helix 41	AE5	D	243	247	Right-handed 310
Helix 42	AE6	D	248	266	Right-handed alpha
Helix 43	AE7	D	269	275	Right-handed alpha
Helix 44	AE8	D	290	293	Right-handed 310
Helix 45	AE9	D	294	308	Right-handed alpha
Helix 46	AF1	D	310	320	Right-handed alpha
Helix 47	AF2	D	321	332	Right-handed alpha
Helix 48	AF3	D	339	349	Right-handed alpha
Helix 49	AF4	D	350	353	Right-handed 310
Helix 50	AF5	D	366	368	Right-handed 310
Helix 51	AF6	D	372	382	Right-handed alpha
Helix 52	AF7	D	412	417	Right-handed alpha
Helix 53	AF8	D	421	432	Right-handed alpha
Helix 54	AF9	D	452	464	Right-handed alpha
Helix 55	AG1	E	169	178	Right-handed alpha
Helix 56	AG2	F	2	9	Right-handed alpha
Helix 57	AG3	F	14	22	Right-handed alpha
Helix 58	AG4	F	30	41	Right-handed alpha
Helix 59	AG5	F	47	58	Right-handed alpha

There are 10 sheets in PDB entry 7E15. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	122	first strand
Strand 2	A	100	104	parallel
Strand 3	A	78	82	parallel
Strand 4	A	27	32	parallel
Strand 5	A	55	60	parallel
Strand 6	B	164	168	anti-parallel
Strand 7	B	136	141	anti-parallel
Strand 8	B	181	184	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	197	first strand
Strand 2	A	277	282	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	360	363	first strand
Strand 2	A	392	397	parallel
Strand 3	A	404	410	anti-parallel
Strand 4	A	443	449	anti-parallel
Strand 5	A	437	439	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	149	first strand
Strand 2	B	155	156	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	12	13	first strand
Strand 2	C	45	46	parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	122	first strand
Strand 2	D	100	104	parallel
Strand 3	D	78	82	parallel
Strand 4	D	27	32	parallel
Strand 5	D	55	60	parallel
Strand 6	E	164	168	anti-parallel
Strand 7	E	136	141	anti-parallel
Strand 8	E	181	184	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	192	197	first strand
Strand 2	D	277	282	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	360	365	first strand
Strand 2	D	392	397	parallel
Strand 3	D	404	410	anti-parallel
Strand 4	D	443	449	anti-parallel
Strand 5	D	436	439	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	148	149	first strand
Strand 2	E	155	156	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	12	13	first strand
Strand 2	F	45	46	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7E15

Analysis of interatomic Contacts of Structural Units in PDB entry:
7E15