Analysis of interatomic Contacts of Structural Units in PDB entry:
7E17


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E17 entry

There are 2 chains in PDB entry 7E17 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0ASP 277
B
 SER 0ASP 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7E17. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
94 98Right-handed 310
Helix 2
AA2
A
173 179Right-handed alpha
Helix 3
AA3
A
183 187Right-handed 310
Helix 4
AA4
A
243 249Right-handed alpha
Helix 5
AA5
A
273 277Right-handed 310
Helix 6
AA6
B
94 98Right-handed 310
Helix 7
AA7
B
173 178Right-handed alpha
Helix 8
AA8
B
183 187Right-handed 310
Helix 9
AA9
B
243 249Right-handed alpha
Helix 10
AB1
B
273 277Right-handed 310
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There are 4 sheets in PDB entry 7E17. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 16first strand
Strand 2
A
2 7anti-parallel
Strand 3
A
36 46anti-parallel
Strand 4
A
23 33anti-parallel
Strand 5
B
62 71anti-parallel
Strand 6
B
164 171anti-parallel
Strand 7
B
155 160anti-parallel
Strand 8
B
238 242anti-parallel
Strand 9
B
189 198anti-parallel
Strand 10
B
211 216anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 92first strand
Strand 2
A
36 46anti-parallel
Strand 3
A
23 33anti-parallel
Strand 4
B
62 71anti-parallel
Strand 5
B
164 171anti-parallel
Strand 6
B
155 160anti-parallel
Strand 7
B
238 242anti-parallel
Strand 8
B
221 226anti-parallel
Strand 9
B
262 266anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 92first strand
Strand 2
B
36 46anti-parallel
Strand 3
B
23 33anti-parallel
Strand 4
A
62 71anti-parallel
Strand 5
A
164 171anti-parallel
Strand 6
A
155 160anti-parallel
Strand 7
A
236 242anti-parallel
Strand 8
A
221 227anti-parallel
Strand 9
A
262 266anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 216first strand
Strand 2
A
189 199anti-parallel
Strand 3
A
236 242anti-parallel
Strand 4
A
155 160anti-parallel
Strand 5
A
164 171anti-parallel
Strand 6
A
62 71anti-parallel
Strand 7
B
23 33anti-parallel
Strand 8
B
36 46anti-parallel
Strand 9
B
2 7anti-parallel
Strand 10
B
13 16anti-parallel
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