Analysis of interatomic Contacts of Structural Units in PDB entry:
7E1E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E1E entry

There are 3 chains in PDB entry 7E1E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 54ARG 332
B
 ARG 54ARG 332
C
 ARG 54ARG 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7E1E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
55 63Right-handed alpha
Helix 2
AA2
A
88 92Right-handed 310
Helix 3
AA3
A
154 157Right-handed 310
Helix 4
AA4
A
174 176Right-handed 310
Helix 5
AA5
A
177 182Right-handed alpha
Helix 6
AA6
A
193 197Right-handed 310
Helix 7
AA7
A
199 204Right-handed alpha
Helix 8
AA8
A
217 221Right-handed 310
Helix 9
AA9
A
233 241Right-handed alpha
Helix 10
AB1
A
242 247Right-handed alpha
Helix 11
AB2
A
279 283Right-handed 310
Helix 12
AB3
A
319 324Right-handed alpha
Helix 13
AB4
B
55 63Right-handed alpha
Helix 14
AB5
B
88 92Right-handed 310
Helix 15
AB6
B
154 157Right-handed 310
Helix 16
AB7
B
174 176Right-handed 310
Helix 17
AB8
B
177 182Right-handed alpha
Helix 18
AB9
B
193 197Right-handed 310
Helix 19
AC1
B
199 204Right-handed alpha
Helix 20
AC2
B
217 221Right-handed 310
Helix 21
AC3
B
233 241Right-handed alpha
Helix 22
AC4
B
242 247Right-handed alpha
Helix 23
AC5
B
279 283Right-handed 310
Helix 24
AC6
B
319 324Right-handed alpha
Helix 25
AC7
C
55 63Right-handed alpha
Helix 26
AC8
C
88 92Right-handed 310
Helix 27
AC9
C
154 157Right-handed 310
Helix 28
AD1
C
174 176Right-handed 310
Helix 29
AD2
C
177 182Right-handed alpha
Helix 30
AD3
C
193 197Right-handed 310
Helix 31
AD4
C
199 204Right-handed alpha
Helix 32
AD5
C
217 221Right-handed 310
Helix 33
AD6
C
233 241Right-handed alpha
Helix 34
AD7
C
242 247Right-handed alpha
Helix 35
AD8
C
279 283Right-handed 310
Helix 36
AD9
C
319 324Right-handed alpha
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There are 9 sheets in PDB entry 7E1E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 74first strand
Strand 2
A
80 86anti-parallel
Strand 3
A
94 100anti-parallel
Strand 4
A
151 152anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 74first strand
Strand 2
A
80 86anti-parallel
Strand 3
A
94 100anti-parallel
Strand 4
A
325 332anti-parallel
Strand 5
A
163 170anti-parallel
Strand 6
A
184 188anti-parallel
Strand 7
A
224 231anti-parallel
Strand 8
A
253 259anti-parallel
Strand 9
A
265 269anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 251first strand
Strand 2
A
272 274anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 74first strand
Strand 2
B
80 86anti-parallel
Strand 3
B
94 100anti-parallel
Strand 4
B
151 152anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
69 74first strand
Strand 2
B
80 86anti-parallel
Strand 3
B
94 100anti-parallel
Strand 4
B
325 332anti-parallel
Strand 5
B
163 170anti-parallel
Strand 6
B
184 188anti-parallel
Strand 7
B
224 231anti-parallel
Strand 8
B
253 259anti-parallel
Strand 9
B
265 269anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 251first strand
Strand 2
B
272 274anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
69 74first strand
Strand 2
C
80 86anti-parallel
Strand 3
C
94 100anti-parallel
Strand 4
C
151 152anti-parallel
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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
69 74first strand
Strand 2
C
80 86anti-parallel
Strand 3
C
94 100anti-parallel
Strand 4
C
325 332anti-parallel
Strand 5
C
163 170anti-parallel
Strand 6
C
184 188anti-parallel
Strand 7
C
224 231anti-parallel
Strand 8
C
253 259anti-parallel
Strand 9
C
265 269anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
249 251first strand
Strand 2
C
272 274anti-parallel
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