Analysis of interatomic Contacts of Structural Units in PDB entry:
7E24


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E24 entry

There are 4 chains in PDB entry 7E24 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2GLY 249
B
 LYS 2GLY 249
C
 LYS 2GLY 249
D
 HIS -1GLY 249
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 7E24. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 24Right-handed alpha
Helix 2
AA2
A
34 49Right-handed alpha
Helix 3
AA3
A
63 73Right-handed alpha
Helix 4
AA4
A
93 97Right-handed 310
Helix 5
AA5
A
98 110Right-handed alpha
Helix 6
AA6
A
110 125Right-handed alpha
Helix 7
AA7
A
137 140Right-handed 310
Helix 8
AA8
A
147 171Right-handed alpha
Helix 9
AA9
A
188 195Right-handed alpha
Helix 10
AB1
A
200 205Right-handed alpha
Helix 11
AB2
A
211 223Right-handed alpha
Helix 12
AB3
B
11 24Right-handed alpha
Helix 13
AB4
B
34 49Right-handed alpha
Helix 14
AB5
B
63 73Right-handed alpha
Helix 15
AB6
B
93 97Right-handed 310
Helix 16
AB7
B
98 110Right-handed alpha
Helix 17
AB8
B
110 125Right-handed alpha
Helix 18
AB9
B
137 140Right-handed 310
Helix 19
AC1
B
147 171Right-handed alpha
Helix 20
AC2
B
188 195Right-handed alpha
Helix 21
AC3
B
200 205Right-handed alpha
Helix 22
AC4
B
211 223Right-handed alpha
Helix 23
AC5
C
11 24Right-handed alpha
Helix 24
AC6
C
34 49Right-handed alpha
Helix 25
AC7
C
63 73Right-handed alpha
Helix 26
AC8
C
93 97Right-handed 310
Helix 27
AC9
C
98 110Right-handed alpha
Helix 28
AD1
C
110 125Right-handed alpha
Helix 29
AD2
C
137 140Right-handed 310
Helix 30
AD3
C
147 171Right-handed alpha
Helix 31
AD4
C
188 195Right-handed alpha
Helix 32
AD5
C
200 205Right-handed alpha
Helix 33
AD6
C
210 223Right-handed alpha
Helix 34
AD7
D
11 24Right-handed alpha
Helix 35
AD8
D
34 49Right-handed alpha
Helix 36
AD9
D
63 73Right-handed alpha
Helix 37
AE1
D
93 97Right-handed 310
Helix 38
AE2
D
98 110Right-handed alpha
Helix 39
AE3
D
110 125Right-handed alpha
Helix 40
AE4
D
137 140Right-handed 310
Helix 41
AE5
D
147 171Right-handed alpha
Helix 42
AE6
D
188 195Right-handed alpha
Helix 43
AE7
D
200 205Right-handed alpha
Helix 44
AE8
D
211 223Right-handed alpha
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There are 11 sheets in PDB entry 7E24. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 58first strand
Strand 2
A
27 32parallel
Strand 3
A
3 7parallel
Strand 4
A
79 84parallel
Strand 5
A
131 135parallel
Strand 6
A
176 181parallel
Strand 7
A
228 231parallel
Strand 8
A
238 241anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
B
246 247parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
185 186first strand
Strand 2
A
209 210parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
246 247first strand
Strand 2
B
142 143parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 58first strand
Strand 2
B
27 32parallel
Strand 3
B
3 7parallel
Strand 4
B
79 84parallel
Strand 5
B
131 135parallel
Strand 6
B
176 181parallel
Strand 7
B
228 231parallel
Strand 8
B
238 241anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 186first strand
Strand 2
B
209 210parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 58first strand
Strand 2
C
27 32parallel
Strand 3
C
3 7parallel
Strand 4
C
79 84parallel
Strand 5
C
131 135parallel
Strand 6
C
176 181parallel
Strand 7
C
228 231parallel
Strand 8
C
238 241anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
142 143first strand
Strand 2
D
246 247parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
246 247first strand
Strand 2
D
142 143parallel
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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
54 58first strand
Strand 2
D
27 32parallel
Strand 3
D
2 7parallel
Strand 4
D
78 84parallel
Strand 5
D
131 135parallel
Strand 6
D
176 181parallel
Strand 7
D
228 231parallel
Strand 8
D
238 241anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
185 186first strand
Strand 2
D
209 210parallel
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