Analysis of interatomic Contacts of Structural Units in PDB entry:
7E2E


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E2E entry

There are 4 chains in PDB entry 7E2E (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 289ASP 519
P
 ARG 205THR 216
B
 PHE 289ASP 519
Q
 ARG 205THR 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 24 helices in PDB entry 7E2E. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
290 301Right-handed alpha
Helix 2
AA2
A
325 342Right-handed alpha
Helix 3
AA3
A
344 348Right-handed 310
Helix 4
AA4
A
349 373Right-handed alpha
Helix 5
AA5
A
390 396Right-handed alpha
Helix 6
AA6
A
400 414Right-handed alpha
Helix 7
AA7
A
418 432Right-handed alpha
Helix 8
AA8
A
440 459Right-handed alpha
Helix 9
AA9
A
472 479Right-handed alpha
Helix 10
AB1
A
480 502Right-handed alpha
Helix 11
AB2
A
507 516Right-handed alpha
Helix 12
AB3
P
207 216Right-handed alpha
Helix 13
AB4
B
290 301Right-handed alpha
Helix 14
AB5
B
325 342Right-handed alpha
Helix 15
AB6
B
344 348Right-handed 310
Helix 16
AB7
B
349 373Right-handed alpha
Helix 17
AB8
B
390 396Right-handed alpha
Helix 18
AB9
B
400 414Right-handed alpha
Helix 19
AC1
B
418 432Right-handed alpha
Helix 20
AC2
B
440 459Right-handed alpha
Helix 21
AC3
B
472 479Right-handed alpha
Helix 22
AC4
B
480 502Right-handed alpha
Helix 23
AC5
B
507 516Right-handed alpha
Helix 24
AC6
Q
207 216Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 7E2E. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 381first strand
Strand 2
A
387 389anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
379 381first strand
Strand 2
B
387 389anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il