Analysis of interatomic Contacts of Structural Units in PDB entry:
7E3N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E3N entry

There is 1 chain in PDB entry 7E3N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7ALA 407
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 19 helices in PDB entry 7E3N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
16 31Right-handed alpha
Helix 2
AA2
A
45 52Right-handed alpha
Helix 3
AA3
A
54 68Right-handed alpha
Helix 4
AA4
A
79 87Right-handed alpha
Helix 5
AA5
A
94 104Right-handed alpha
Helix 6
AA6
A
136 141Right-handed 310
Helix 7
AA7
A
184 203Right-handed alpha
Helix 8
AA8
A
217 234Right-handed alpha
Helix 9
AA9
A
234 241Right-handed alpha
Helix 10
AB1
A
250 260Right-handed alpha
Helix 11
AB2
A
269 285Right-handed alpha
Helix 12
AB3
A
286 288Right-handed 310
Helix 13
AB4
A
311 320Right-handed alpha
Helix 14
AB5
A
328 346Right-handed alpha
Helix 15
AB6
A
348 368Right-handed alpha
Helix 16
AB7
A
372 381Right-handed alpha
Helix 17
AB8
A
382 385Right-handed 310
Helix 18
AB9
A
386 390Right-handed 310
Helix 19
AC1
A
392 407Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 7E3N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 43first strand
Strand 2
A
10 14parallel
Strand 3
A
69 72parallel
Strand 4
A
302 306parallel
Strand 5
A
290 295anti-parallel
Strand 6
A
106 111anti-parallel
Strand 7
A
129 133anti-parallel
Strand 8
A
265 268parallel
Strand 9
A
206 210parallel
Strand 10
A
245 249parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 146first strand
Strand 2
A
176 180anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 156first strand
Strand 2
A
165 172anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il