Analysis of interatomic Contacts of Structural Units in PDB entry:
7E40


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E40 entry

There are 4 chains in PDB entry 7E40 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 248GLN 376
B
 SER 0TYR 357
C
 SER 247GLN 375
D
 GLU 13TYR 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 7E40. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
252 266Right-handed alpha
Helix 2
AA2
A
273 282Right-handed alpha
Helix 3
AA3
A
287 302Right-handed alpha
Helix 4
AA4
A
330 375Right-handed alpha
Helix 5
AA5
B
2 13Right-handed alpha
Helix 6
AA6
B
15 19Right-handed 310
Helix 7
AA7
B
24 33Right-handed alpha
Helix 8
AA8
B
66 109Right-handed alpha
Helix 9
AA9
B
113 157Right-handed alpha
Helix 10
AB1
B
160 169Right-handed alpha
Helix 11
AB2
B
171 176Right-handed alpha
Helix 12
AB3
B
178 194Right-handed alpha
Helix 13
AB4
B
197 207Right-handed alpha
Helix 14
AB5
B
234 247Right-handed alpha
Helix 15
AB6
B
255 276Right-handed alpha
Helix 16
AB7
B
280 287Right-handed alpha
Helix 17
AB8
B
288 309Right-handed alpha
Helix 18
AB9
B
310 319Right-handed alpha
Helix 19
AC1
B
321 330Right-handed alpha
Helix 20
AC2
B
332 338Right-handed alpha
Helix 21
AC3
B
338 352Right-handed alpha
Helix 22
AC4
C
252 266Right-handed alpha
Helix 23
AC5
C
273 282Right-handed alpha
Helix 24
AC6
C
287 303Right-handed alpha
Helix 25
AC7
C
333 374Right-handed alpha
Helix 26
AC8
D
15 19Right-handed 310
Helix 27
AC9
D
24 33Right-handed alpha
Helix 28
AD1
D
66 108Right-handed alpha
Helix 29
AD2
D
113 157Right-handed alpha
Helix 30
AD3
D
160 169Right-handed alpha
Helix 31
AD4
D
171 176Right-handed alpha
Helix 32
AD5
D
176 193Right-handed alpha
Helix 33
AD6
D
197 207Right-handed alpha
Helix 34
AD7
D
234 247Right-handed alpha
Helix 35
AD8
D
255 277Right-handed alpha
Helix 36
AD9
D
280 287Right-handed alpha
Helix 37
AE1
D
288 303Right-handed alpha
Helix 38
AE2
D
303 308Right-handed alpha
Helix 39
AE3
D
310 319Right-handed alpha
Helix 40
AE4
D
321 330Right-handed alpha
Helix 41
AE5
D
332 338Right-handed alpha
Helix 42
AE6
D
338 352Right-handed alpha
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There are 2 sheets in PDB entry 7E40. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
210 215first strand
Strand 2
B
221 224anti-parallel
Strand 3
B
227 230anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
210 215first strand
Strand 2
D
221 224anti-parallel
Strand 3
D
227 228anti-parallel
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