Analysis of interatomic Contacts of Structural Units in PDB entry:
7E43


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E43 entry

There are 2 chains in PDB entry 7E43 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 34LYS 357
A
 ASP 34LYS 357
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 7E43. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
44 54Right-handed alpha
Helix 2
AA2
B
74 76Right-handed 310
Helix 3
AA3
B
77 82Right-handed alpha
Helix 4
AA4
B
97 107Right-handed alpha
Helix 5
AA5
B
123 125Right-handed 310
Helix 6
AA6
B
135 152Right-handed alpha
Helix 7
AA7
B
174 179Right-handed alpha
Helix 8
AA8
B
187 193Right-handed 310
Helix 9
AA9
B
205 213Right-handed alpha
Helix 10
AB1
B
214 224Right-handed alpha
Helix 11
AB2
B
283 287Right-handed 310
Helix 12
AB3
B
309 313Right-handed 310
Helix 13
AB4
B
330 332Right-handed 310
Helix 14
AB5
B
337 339Right-handed 310
Helix 15
AB6
B
340 355Right-handed alpha
Helix 16
AB7
A
44 54Right-handed alpha
Helix 17
AB8
A
74 76Right-handed 310
Helix 18
AB9
A
77 82Right-handed alpha
Helix 19
AC1
A
97 107Right-handed alpha
Helix 20
AC2
A
123 125Right-handed 310
Helix 21
AC3
A
135 150Right-handed alpha
Helix 22
AC4
A
174 179Right-handed alpha
Helix 23
AC5
A
187 193Right-handed 310
Helix 24
AC6
A
205 213Right-handed alpha
Helix 25
AC7
A
214 224Right-handed alpha
Helix 26
AC8
A
309 313Right-handed 310
Helix 27
AC9
A
329 333Right-handed alpha
Helix 28
AD1
A
337 339Right-handed 310
Helix 29
AD2
A
340 355Right-handed alpha
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There are 8 sheets in PDB entry 7E43. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 161first strand
Strand 2
B
127 131parallel
Strand 3
B
36 42anti-parallel
Strand 4
B
84 91anti-parallel
Strand 5
B
58 66anti-parallel
Strand 6
B
165 167anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 117first strand
Strand 2
B
120 121anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
251 254first strand
Strand 2
B
241 245anti-parallel
Strand 3
B
324 328anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
258 259first strand
Strand 2
B
267 268anti-parallel
Strand 3
B
316 319anti-parallel
Strand 4
B
300 305anti-parallel
Strand 5
B
289 294anti-parallel
Strand 6
B
277 282anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 161first strand
Strand 2
A
127 131parallel
Strand 3
A
36 42anti-parallel
Strand 4
A
84 91anti-parallel
Strand 5
A
58 66anti-parallel
Strand 6
A
165 167anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 117first strand
Strand 2
A
120 121anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 254first strand
Strand 2
A
241 245anti-parallel
Strand 3
A
324 328anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 259first strand
Strand 2
A
267 268anti-parallel
Strand 3
A
316 319anti-parallel
Strand 4
A
300 305anti-parallel
Strand 5
A
289 294anti-parallel
Strand 6
A
277 282anti-parallel
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