Analysis of interatomic Contacts of Structural Units in PDB entry:
7E4B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E4B entry

There are 3 chains in PDB entry 7E4B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1ALA 114
B
 PRO 1ALA 114
C
 PRO 1ALA 114
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7E4B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 14Right-handed 310
Helix 2
AA2
A
17 31Right-handed alpha
Helix 3
AA3
A
33 36Right-handed 310
Helix 4
AA4
A
68 88Right-handed alpha
Helix 5
AA5
A
90 92Right-handed 310
Helix 6
AA6
A
102 104Right-handed 310
Helix 7
AA7
B
10 14Right-handed 310
Helix 8
AA8
B
17 31Right-handed alpha
Helix 9
AA9
B
33 36Right-handed 310
Helix 10
AB1
B
68 88Right-handed alpha
Helix 11
AB2
B
90 92Right-handed 310
Helix 12
AB3
B
102 104Right-handed 310
Helix 13
AB4
C
10 14Right-handed 310
Helix 14
AB5
C
17 31Right-handed alpha
Helix 15
AB6
C
33 36Right-handed 310
Helix 16
AB7
C
68 88Right-handed alpha
Helix 17
AB8
C
90 92Right-handed 310
Helix 18
AB9
C
102 104Right-handed 310
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There are 3 sheets in PDB entry 7E4B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
111 112first strand
Strand 2
B
106 108anti-parallel
Strand 3
A
94 100anti-parallel
Strand 4
A
57 63parallel
Strand 5
A
2 7anti-parallel
Strand 6
A
38 42parallel
Strand 7
C
46 49anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 49first strand
Strand 2
B
38 42anti-parallel
Strand 3
B
2 7parallel
Strand 4
B
57 63anti-parallel
Strand 5
B
94 100parallel
Strand 6
C
106 108anti-parallel
Strand 7
C
111 112anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 112first strand
Strand 2
A
106 108anti-parallel
Strand 3
C
94 100anti-parallel
Strand 4
C
57 63parallel
Strand 5
C
2 7anti-parallel
Strand 6
C
38 42parallel
Strand 7
B
46 49anti-parallel
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