Analysis of interatomic Contacts of Structural Units in PDB entry:
7E52


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7E52 entry

There is 1 chain in PDB entry 7E52 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2HIS 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7E52. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
14 27Right-handed alpha
Helix 2
AA2
A
60 75Right-handed alpha
Helix 3
AA3
A
121 128Right-handed alpha
Helix 4
AA4
A
135 140Right-handed alpha
Helix 5
AA5
A
141 144Right-handed 310
Helix 6
AA6
A
154 165Right-handed alpha
Helix 7
AA7
A
183 196Right-handed alpha
Helix 8
AA8
A
248 252Right-handed 310
Helix 9
AA9
A
284 287Right-handed 310
Helix 10
AB1
A
293 318Right-handed alpha
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There are 6 sheets in PDB entry 7E52. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
32 34parallel
Strand 3
A
4 11parallel
Strand 4
A
102 110parallel
Strand 5
A
94 98anti-parallel
Strand 6
A
84 88anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
32 34parallel
Strand 3
A
4 11parallel
Strand 4
A
102 110parallel
Strand 5
A
280 282parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 117first strand
Strand 2
A
243 246anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 133first strand
Strand 2
A
237 240parallel
Strand 3
A
147 151parallel
Strand 4
A
170 174parallel
Strand 5
A
199 202parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 213first strand
Strand 2
A
216 224anti-parallel
Strand 3
A
230 234anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
261 262anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il